MirGeneDB 3.0
MirGeneDB ID

Gmo-Mir-148-P2

Family name MIR-148 (all species)
Species Cod (Gadus morhua)
MiRBase ID gmo-mir-148
Paralogues Gmo-Mir-148-P3 
Orthologues Cmi-Mir-148-P2  Dre-Mir-148-P2  Ebu-Mir-148  Loc-Mir-148-P2  Mal-Mir-148-P2  Pma-Mir-148-o2  Tni-Mir-148-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Gadus_morhua.gadMor1.dna.toplevel)		 GeneScaffold_1009: 245024-245081 [-] UCSC Ensembl
Seed CAGUGCA
Precursor
(pre-Mir +30nt flank)		 
CUGUGAGGUGGCACUGUGGCUCCCCAAAUAAAGUUCUGUGAUACACUCAGACUGUAAUUGACGGUAGUCAGUGCAUUACAGAACUUUGUUUUGGGAGUAAAGUACUAACCGGGAACCG
Get precursor sequence
Structure
        10          20        30        40        50         
CUGUGAGGUGGCACUGUG--|     C                 A    CA    GUAAU 
                    GCUCCC AAAUAAAGUUCUGUGAU CACU  GACU     U
                    UGAGGG UUUGUUUCAAGACAUUA GUGA  CUGA     G
GCCAAGGGCCAAUCAUGAAA^     U                 C    --    UGGCA 
      110       100        90        80        70          60
Deep sequencing
Go to detailed chart
CommentThe highest read count is monoadenylated at the 3' end of the 3p arm.
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Br Gi He In Li Sk Sp Wh
Star sequence

Gmo-Mir-148-P2_5p*
mirBase accessionMIMAT0044086
Sequence 
0- AAGUUCUGUGAUACACUCAGACU -23
Get sequence
Mature sequence

Gmo-Mir-148-P2_3p
mirBase accessionMIMAT0044087
Sequence 
37- UCAGUGCAUUACAGAACUUUG -58
Get sequence