MirGeneDB 2.1

MirGeneDB ID

Tni-Mir-191

Family name MIR-191 (all species)
Seed AACGGAA
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID
Paralogues
Orthologues Aca-Mir-191  Ami-Mir-191  Bta-Mir-191  Cfa-Mir-191  Cmi-Mir-191  Cpi-Mir-191  Cpo-Mir-191  Dno-Mir-191  Dre-Mir-191  Ete-Mir-191  Gga-Mir-191-v1  Gga-Mir-191-v2  Gja-Mir-191  Gmo-Mir-191  Hsa-Mir-191  Loc-Mir-191  Mal-Mir-191  Mdo-Mir-191  Mml-Mir-191  Mmu-Mir-191  Mun-Mir-191  Oan-Mir-191  Ocu-Mir-191  Pbv-Mir-191  Rno-Mir-191  Sha-Mir-191  Spt-Mir-191  Sto-Mir-191  Tgu-Mir-191  Xla-Mir-191-P1  Xla-Mir-191-P2  Xtr-Mir-191 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)
9: 665421-665482 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACCUGCAUCUCGUUUUGGUGGGUGGGAUGGUAACGGAACCCAUAAUGCAGCUGUAAUUUCAGAGGUCCAGCUGGUUAUGGGGUCCGUUUCCAUCCCACGACGCACAGAACAUCGGGAUGGUU
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Structure
        10          20         30        40        50        60
ACCUGCAUCUCGUUUUG--   G-|        U      A        G      UAAUUU 
                   GUG  GUGGGAUGG AACGGA CCCAUAAU CAGCUG      C
                   CGC  CACCCUACC UUGCCU GGGUAUUG GUCGAC      A
UUGGUAGGGCUACAAGACA   AG^        U      G        -      CUGGAG 
120       110       100        90        80         70
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Sp Sp Sp To
Mature sequence

Tni-Mir-191_5p

mirBase accessionNone
Sequence
0- UAACGGAACCCAUAAUGCAGCUG -23
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Star sequence

Tni-Mir-191_3p*

mirBase accessionNone
Sequence
39- GCUGGUUAUGGGGUCCGUUUCCA -62
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