Mir-191

MirGeneDB ID

Xtr-Mir-191

Family name

MIR-191 (all species)

Species

Tropical clawed frog (Xenopus tropicalis)

MiRBase ID

xtr-mir-191

Paralogues

Orthologues

Aca-Mir-191 Ami-Mir-191 Bta-Mir-191 Cfa-Mir-191 Cja-Mir-191 Cmi-Mir-191 Cpi-Mir-191 Cpo-Mir-191 Dno-Mir-191 Dre-Mir-191 Eca-Mir-191 Ete-Mir-191 Gga-Mir-191-v1 Gja-Mir-191 Gmo-Mir-191 Hsa-Mir-191 Laf-Mir-191 Loc-Mir-191 Mal-Mir-191 Mdo-Mir-191 Mml-Mir-191 Mmr-Mir-191 Mmu-Mir-191 Mun-Mir-191 Neu-Mir-191 Oan-Mir-191 Ocu-Mir-191 Pab-Mir-191 Pbv-Mir-191 Rno-Mir-191 Sha-Mir-191 Spt-Mir-191 Sto-Mir-191 Tgu-Mir-191 Tni-Mir-191 Xla-Mir-191-P1 Xla-Mir-191-P2

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Gnathostomata

Genome context
(xenTro9_add)

chr4: 126192673-126192732 [-] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-191)

Mir-2970 chr4: 126187377-126187435 [-] UCSC Ensembl
Mir-425 chr4: 126189462-126189524 [-] UCSC Ensembl
Mir-191 chr4: 126192673-126192732 [-] UCSC Ensembl

Seed

AACGGAA

Precursor
(pre-Mir +30nt flank)

GGGAAGAGUUGGUACAGGCGGUAGCUCUGACAACGGAAUCCCAAAAGCAGCUGUUGUGAAAAUGUUCAGCUGCAGUUGGGACCCGUUCACGGAUCUAUUGCCCAUUCAUCGCCCUCAGGG

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Structure

        10          20        30        40        50          
GGGAAGAGUUGGUACAG--|      C    AC     AA      AA       UUGUGA 
                   GCGGUAG UCUG  AACGG  UCCCAA  GCAGCUG      \
                   CGUUAUC AGGC  UUGCC  AGGGUU  CGUCGAC      A
GGGACUCCCGCUACUUACC^      U    AC     C-      GA       UUGUAA 
.       110       100        90         80        70

Deep sequencing

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3' NTU

Unknown

Motifs

CNNC at 3p(+17)

Tissue expression

An	Br	Em	Em	He	Ve

Mature sequence

Xtr-Mir-191_5p

mirBase accession

MIMAT0003689

Sequence

0- CAACGGAAUCCCAAAAGCAGCUG -23

Get sequence

Proposed targets

TargetScanVert: xtr-miR-191

Star sequence

Xtr-Mir-191_3p*

mirBase accession

None

Sequence

38- GCUGCAGUUGGGACCCGUUCAC -60

Get sequence