MirGeneDB 2.1

MirGeneDB ID

Xtr-Mir-191

Family name MIR-191 (all species)
Seed AACGGAA
Species Tropical clawed frog (Xenopus tropicalis)
MiRBase ID xtr-mir-191
Paralogues
Orthologues Aca-Mir-191  Ami-Mir-191  Bta-Mir-191  Cfa-Mir-191  Cmi-Mir-191  Cpi-Mir-191  Cpo-Mir-191  Dno-Mir-191  Dre-Mir-191  Ete-Mir-191  Gga-Mir-191-v1  Gga-Mir-191-v2  Gja-Mir-191  Gmo-Mir-191  Hsa-Mir-191  Loc-Mir-191  Mal-Mir-191  Mdo-Mir-191  Mml-Mir-191  Mmu-Mir-191  Mun-Mir-191  Oan-Mir-191  Ocu-Mir-191  Pbv-Mir-191  Rno-Mir-191  Sha-Mir-191  Spt-Mir-191  Sto-Mir-191  Tgu-Mir-191  Tni-Mir-191  Xla-Mir-191-P1  Xla-Mir-191-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(xenTro9_add)
chr4: 126192673-126192732 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-191)
Mir-425 chr4: 126189462-126189524 [-] UCSC Ensembl
Mir-191 chr4: 126192673-126192732 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGAAGAGUUGGUACAGGCGGUAGCUCUGACAACGGAAUCCCAAAAGCAGCUGUUGUGAAAAUGUUCAGCUGCAGUUGGGACCCGUUCACGGAUCUAUUGCCCAUUCAUCGCCCUCAGGG
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Structure
        10          20        30        40        50          
GGGAAGAGUUGGUACAG--|      C    AC     AA      AA       UUGUGA 
                   GCGGUAG UCUG  AACGG  UCCCAA  GCAGCUG      \
                   CGUUAUC AGGC  UUGCC  AGGGUU  CGUCGAC      A
GGGACUCCCGCUACUUACC^      U    AC     C-      GA       UUGUAA 
.       110       100        90         80        70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Em Em Em Em He
Mature sequence

Xtr-Mir-191_5p

mirBase accessionMIMAT0003689
Sequence
0- CAACGGAAUCCCAAAAGCAGCUG -23
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Proposed targets TargetScanVert: xtr-miR-191
Star sequence

Xtr-Mir-191_3p*

mirBase accessionNone
Sequence
38- GCUGCAGUUGGGACCCGUUCAC -60
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