MirGeneDB 3.0
MirGeneDB ID

Gja-Mir-191

Family name MIR-191 (all species)
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues
Orthologues Aca-Mir-191  Ami-Mir-191  Bta-Mir-191  Cfa-Mir-191  Cja-Mir-191  Cmi-Mir-191  Cpi-Mir-191  Cpo-Mir-191  Dno-Mir-191  Dre-Mir-191  Eca-Mir-191  Ete-Mir-191  Gga-Mir-191-v1  Gmo-Mir-191  Hsa-Mir-191  Laf-Mir-191  Loc-Mir-191  Mal-Mir-191  Mdo-Mir-191  Mml-Mir-191  Mmr-Mir-191  Mmu-Mir-191  Mun-Mir-191  Neu-Mir-191  Oan-Mir-191  Ocu-Mir-191  Pab-Mir-191  Pbv-Mir-191  Rno-Mir-191  Sha-Mir-191  Spt-Mir-191  Sto-Mir-191  Tgu-Mir-191  Tni-Mir-191  Xla-Mir-191-P1  Xla-Mir-191-P2  Xtr-Mir-191 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015173131.1: 768711-768774 [+]
Clustered miRNAs
(< 50kb from Mir-191)		 Mir-191 NW_015173131.1: 768711-768774 [+]
Mir-425 NW_015173131.1: 772282-772343 [+]
Mir-2970 NW_015173131.1: 774145-774203 [+]
Seed AACGGAA
Precursor
(pre-Mir +30nt flank)		 
GACCUCCUGCUGUGAUGGCGAGAUAGCGGGCAACGGAAUCCCAAAAGCAGCUGUUCUUUUCUUAGCAUUCCAGCUGCGCUUGGAUUUCGUUUCCUGCUCUCCUGCUCUGCUCUCCAGGGUGUUG
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Structure
        10          20        30        40        50        60  
GACCUCCUGCUGUGAUG--|  A  U      C          C  AA       UUCUUUUC 
                   GCG GA AGCGGG AACGGAAUCC AA  GCAGCUG        \
                   CGU CU UCGUCC UUGCUUUAGG UU  CGUCGAC        U
GUUGUGGGACCUCUCGUCU^  C  C      U          -  CG       CUUACGAU 
  120       110       100        90         80        70
Deep sequencing
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CommentThere is a second Dicer cut -1 on the 3p arm.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Gja-Mir-191_5p
mirBase accessionNone
Sequence 
0- CAACGGAAUCCCAAAAGCAGCUG -23
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Star sequence

Gja-Mir-191_3p*
mirBase accessionNone
Sequence 
42- GCUGCGCUUGGAUUUCGUUUCC -64
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