MirGeneDB 3.0

MirGeneDB ID

Xla-Mir-191-P1

Family name MIR-191 (all species)
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-191-P2 
Orthologues Aca-Mir-191  Ami-Mir-191  Bta-Mir-191  Cfa-Mir-191  Cja-Mir-191  Cmi-Mir-191  Cpi-Mir-191  Cpo-Mir-191  Dno-Mir-191  Dre-Mir-191  Eca-Mir-191  Ete-Mir-191  Gja-Mir-191  Gmo-Mir-191  Hsa-Mir-191  Laf-Mir-191  Loc-Mir-191  Mal-Mir-191  Mdo-Mir-191  Mml-Mir-191  Mmr-Mir-191  Mmu-Mir-191  Mun-Mir-191  Neu-Mir-191  Oan-Mir-191  Ocu-Mir-191  Pab-Mir-191  Pbv-Mir-191  Rno-Mir-191  Sha-Mir-191  Spt-Mir-191  Sto-Mir-191  Tgu-Mir-191  Tni-Mir-191  Xtr-Mir-191 
Node of Origin (locus) X. laevis
Node of Origin (family) Gnathostomata
Genome context
(GCF_001663975.1_XLA_v2)
NC_030730.1: 131957042-131957101 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-191-P1)
Mir-2970-P1 NC_030730.1: 131950199-131950257 [-] UCSC Ensembl
Mir-425-P1 NC_030730.1: 131952638-131952700 [-] UCSC Ensembl
Mir-191-P1 NC_030730.1: 131957042-131957101 [-] UCSC Ensembl
Seed AACGGAA
Precursor
(pre-Mir +30nt flank)
AUGAAGCGGAGGUACAGGCGGUAGCUCUGGCAACGGAAUCCCAAAAGCAGCUGUUGUGGAAAUGUUCAGCUGCAGUUGGGACCCGUUCACUGAUCUAUUGCAAAUUCAUCAUCCACAGGG
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Structure
        10          20        30        40        50          
AUGAAGCGGAGGUACAG--|      C  UGGC     AA      AA       UUGUGG 
                   GCGGUAG UC    AACGG  UCCCAA  GCAGCUG      \
                   CGUUAUC AG    UUGCC  AGGGUU  CGUCGAC      A
GGGACACCUACUACUUAAA^      U  UCAC     C-      GA       UUGUAA 
.       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Em
Mature sequence

Xla-Mir-191-P1_5p

mirBase accessionNone
Sequence
0- CAACGGAAUCCCAAAAGCAGCUG -23
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Star sequence

Xla-Mir-191-P1_3p*

mirBase accessionNone
Sequence
38- GCUGCAGUUGGGACCCGUUCAC -60
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