| MirGeneDB ID | Spt-Mir-191 |
|---|---|
| Family name | MIR-191 (all species) |
| Species | Tuatara (Sphenodon punctatus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Aca-Mir-191 Ami-Mir-191 Bta-Mir-191 Cfa-Mir-191 Cja-Mir-191 Cmi-Mir-191 Cpi-Mir-191 Cpo-Mir-191 Dno-Mir-191 Dre-Mir-191 Eca-Mir-191 Ete-Mir-191 Gga-Mir-191-v1 Gja-Mir-191 Gmo-Mir-191 Hsa-Mir-191 Laf-Mir-191 Loc-Mir-191 Mal-Mir-191 Mdo-Mir-191 Mml-Mir-191 Mmr-Mir-191 Mmu-Mir-191 Mun-Mir-191 Neu-Mir-191 Oan-Mir-191 Ocu-Mir-191 Pab-Mir-191 Pbv-Mir-191 Rno-Mir-191 Sha-Mir-191 Sto-Mir-191 Tgu-Mir-191 Tni-Mir-191 Xla-Mir-191-P1 Xla-Mir-191-P2 Xtr-Mir-191 |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Gnathostomata |
| Genome context (GCA_003113815.1_ASM311381v1_TUATARA) |
QEPC01014177.1: 26608-26670 [+] UCSC Ensembl |
| Clustered miRNAs (< 50kb from Mir-191) |
Mir-191
QEPC01014177.1: 26608-26670 [+]
UCSC
Ensembl
Mir-425 QEPC01014177.1: 29597-29658 [+] UCSC Ensembl Mir-2970 QEPC01014177.1: 30619-30677 [+] UCSC Ensembl |
| Seed | AACGGAA |
| Precursor (pre-Mir +30nt flank) |
GGACACUCGAUUCUAUAGUGUGACAGCGGGCAACGGAAUCCCAAAAGCAGCUGUUUCCUCCUAGCAGCUCAGCUGCCCUUGGAUUUCGUUCCCUGCUUUCUCACCCAGGCGCCUUUCCCCGCUGet precursor sequence |
| Structure | 10 20 30 40 50 60 GGACACUCGAUUCUAUA--| U C C C AA UUUCCUC GUG GA AGCGGG AACGGAAUCC AA GCAGCUG C CAC CU UCGUCC UUGCUUUAGG UU CGUCGAC U UCGCCCCUUUCCGCGGACC^ U U C - CC UCGACGA 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Spt-Mir-191_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- CAACGGAAUCCCAAAAGCAGCUG -23
Get sequence
|
| Star sequence | Spt-Mir-191_3p* (predicted) |
| mirBase accession | None |
| Sequence |
41- GCUGCCCUUGGAUUUCGUUCCC -63
Get sequence
|
