MirGeneDB 3.0
142 Drosophila ananassae microRNA genes
Sort by genome coordinates Motifs Tissue expression
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MirGeneDB ID ▼ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC Fe
Dan-Novel-20 None DAN-NOVEL-20 AAGCGCU None None scaffold_12903 550138 550198 + D. ananassae D. ananassae No 1
Dan-Novel-19 None DAN-NOVEL-19 UCCCUAA None None scaffold_12903 535322 535384 + D. ananassae D. ananassae No 1
Dan-Novel-18 None DAN-NOVEL-18 ACUUUGA None None scaffold_12903 534990 535045 + D. ananassae D. ananassae No 1
Dan-Novel-17 None DAN-NOVEL-17 AUUUUGG None None scaffold_13340 7931528 7931586 + D. ananassae D. ananassae No
Dan-Novel-16 None DAN-NOVEL-16 GUCAGGG None None scaffold_13322 1691 1751 + D. ananassae D. ananassae No
Dan-Novel-15 None DAN-NOVEL-15 AGUACAC None None scaffold_13266 4131702 4131759 + D. ananassae D. ananassae No 1
Dan-Novel-14 None DAN-NOVEL-14 UUAAAUA None None scaffold_13117 3425021 3425078 + D. ananassae D. ananassae No 1
Dan-Novel-13 None DAN-NOVEL-13 GAGGAAC None None scaffold_12903 550268 550328 + D. ananassae D. ananassae No
Dan-Novel-12-P2 None DAN-NOVEL-12 AAAGCUG None None scaffold_13045 602935 602992 + D. ananassae D. ananassae No 1
Dan-Novel-12-P1 None DAN-NOVEL-12 AAAGCUG None None scaffold_13045 592980 593037 + D. ananassae D. ananassae No 1
Dan-Novel-11 None DAN-NOVEL-11 AAGCAGU None None scaffold_12929 3159781 3159857 + D. ananassae D. ananassae No
Dan-Novel-10 None DAN-NOVEL-10 CAUAGAU None None scaffold_12903 559716 559778 + D. ananassae D. ananassae No 1 1 1
Dan-Novel-9 None DAN-NOVEL-9 AUGAGAA None None scaffold_12903 558880 558937 + D. ananassae D. ananassae No 1
Dan-Novel-8 None DAN-NOVEL-8 AAGGCAU None None scaffold_12903 555085 555146 + D. ananassae D. ananassae No 1
Dan-Novel-7 None DAN-NOVEL-7 GAGAGGU None None scaffold_12903 554769 554835 + D. ananassae D. ananassae No 1 1
Dan-Novel-6 None DAN-NOVEL-6 AGAGGUA None None scaffold_12903 550718 550780 + D. ananassae D. ananassae No
Dan-Novel-5 None DAN-NOVEL-5 GUAGAAG None None scaffold_12903 550549 550607 + D. ananassae D. ananassae No 1
Dan-Novel-4 None DAN-NOVEL-4 AGGAGAA None None scaffold_12903 550400 550461 + D. ananassae D. ananassae No 1
Dan-Novel-3 None DAN-NOVEL-3 AUUUACA None None scaffold_13335 210927 210985 + D. ananassae D. ananassae No 1
Dan-Novel-2 None DAN-NOVEL-2 AAAAUUG None None scaffold_13335 210773 210833 + D. ananassae D. ananassae No
Dan-Novel-1 None DAN-NOVEL-1 UAGGUUU None None scaffold_13335 210604 210664 + D. ananassae D. ananassae No 1
Dan-Mir-2001 dan-mir-274 MIR-2001 UUGUGAC MIMAT0008448 None scaffold_13337 5918636 5918702 + Bilateria Bilateria No 1
Dan-Mir-1175 None MIR-1175 GAGAUUC None None scaffold_13337 22380422 22380484 - Protostomia Protostomia No 1
Dan-Mir-1010 None MIR-1010 UUCACCU None None scaffold_13340 9102993 9103066 + Drosophila Drosophila Yes
Dan-Mir-1007 None MIR-1007 AAGCUCA None None scaffold_13334 1054393 1054454 + D. melanogaster group D. melanogaster group No
Dan-Mir-1006 None MIR-1006 AAAUUCG None None scaffold_12943 3938340 3938403 + Drosophila Drosophila Yes 1
Dan-Mir-1003 None MIR-1003 CUCACAU None None scaffold_13340 4690341 4690403 - Drosophila Drosophila No 1
Dan-Mir-1000 None MIR-1000 UAUUGUC None None scaffold_13340 3670443 3670511 - Neoptera Neoptera No 1
Dan-Mir-999 None MIR-999 GUUAACU None None scaffold_13340 8622532 8622591 - Diptera Diptera No 1
Dan-Mir-989 None MIR-989 GUGAUGU None None scaffold_13266 5886572 5886705 + Endopterygota Endopterygota No 1
Dan-Mir-988 None MIR-988 CCCUUGU None None scaffold_13266 2579731 2579788 + Panorpida Panorpida No 1 1
Dan-Mir-987 None MIR-987 AAAGUAA None None scaffold_12430 12744 12809 + Glossinidae + Drosophilidae Glossinidae + Drosophilidae No 1
Dan-Mir-986 None MIR-986 CUCGAAU None None scaffold_13266 1670206 1670268 - D. melanogaster group D. melanogaster group No 1
Dan-Mir-978 V None MIR-978 GUCCAGU None None scaffold_13417 2460540 2460602 - D. melanogaster group D. melanogaster group 2 No 1 1
Dan-Mir-977 None MIR-977 CGAUCAC None None scaffold_13417 2467469 2467532 - Drosophila Drosophila No 1
Dan-Mir-976 None MIR-976 UGGAUUA None None scaffold_13417 2467590 2467647 - Drosophila Drosophila No 1
Dan-Mir-975 None MIR-975 CGGAUGU None None scaffold_13417 2467720 2467781 - Drosophila Drosophila No 1 1
Dan-Mir-974 None MIR-974 AGCGAGC None None scaffold_13417 2478498 2478562 - Drosophila Drosophila Unknown 1
Dan-Mir-973 None MIR-973 CUGUUCA None None scaffold_13417 2478669 2478737 - Drosophila Drosophila No 1 1
Dan-Mir-971 None MIR-971 UGGUGUU None None scaffold_13117 3891818 3891881 + Neoptera Neoptera No
Dan-Mir-970 None MIR-970 CAUAAGA None None scaffold_13117 3438256 3438320 + Aparaglossata Aparaglossata No
Dan-Mir-969 None MIR-969 AGUUCCA None None scaffold_13335 1608001 1608062 - Drosophila Drosophila No
Dan-Mir-965 None MIR-965 AAGCGUA None None scaffold_12943 4147981 4148044 + Pancrustacea Pancrustacea No 1
Dan-Mir-964 None MIR-964 UAGAAUA None None scaffold_12916 11085596 11085658 + Drosophila Drosophila Unknown 1
Dan-Mir-963 None MIR-963 CAAGGUA None None scaffold_12916 11085461 11085523 + Drosophila Drosophila No 1 1
Dan-Mir-962 None MIR-962 UAAGGUA None None scaffold_12916 11085121 11085180 + Drosophila Drosophila No 1
Dan-Mir-961 None MIR-961 UUGAUCA None None scaffold_12916 11085018 11085076 + D. melanogaster group D. melanogaster group Unknown 1 1
Dan-Mir-960 None MIR-960 GAGUAUU None None scaffold_12916 11084881 11084940 + Drosophila Drosophila No
Dan-Mir-959 V None MIR-959 UGUCAUC None None scaffold_12916 11084735 11084797 + D. melanogaster group D. melanogaster group 2 No 1
Dan-Mir-957 None MIR-957 GAAACCG None None scaffold_13337 22247699 22247766 - Diptera Diptera No 1 1 1
Dan-Mir-956 V None MIR-956 UUCGAGA None None scaffold_13337 6020256 6020365 - Glossinidae + Drosophilidae Glossinidae + Drosophilidae 2 No
Dan-Mir-955 None MIR-955 AUCGUGC None None scaffold_13337 7606454 7606515 + Drosophila Drosophila No 1
Dan-Mir-932 None MIR-932 CAAUUCC None None scaffold_12916 8482577 8482637 + Neoptera Neoptera No 1 1
Dan-Mir-929 None MIR-929 AAUUGAC None None scaffold_13340 11127750 11127807 + Neoptera Neoptera No 1
Dan-Mir-927-P1 None MIR-927 UUAGAAU None None scaffold_13250 3108686 3108747 + Neoptera Neoptera No
Dan-Mir-375 None MIR-375 UUGUUCG None None scaffold_12916 2747027 2747091 + Nephrozoa Nephrozoa No 1
Dan-Mir-317 dan-mir-317 MIR-317 GAACACA None MIMAT0008452 scaffold_13340 6480005 6480070 + Protostomia Protostomia No 1
Dan-Mir-316 dan-mir-316 MIR-316 GUCUUUU MIMAT0008449 None scaffold_13337 3985769 3985828 - Pancrustacea Pancrustacea No 1
Dan-Mir-315 dan-mir-315 MIR-315 UUUGAUU MIMAT0008459 None scaffold_13337 18585493 18585556 - Nephrozoa Nephrozoa No 1
Dan-Mir-314 dan-mir-314 MIR-314 AUUCGAG None MIMAT0008465 scaffold_13337 6019520 6019605 + Drosophila Drosophila Yes
Dan-Mir-306 dan-mir-306 MIR-306 CAGGUAC MIMAT0008450 None scaffold_12916 15864875 15864933 - Neoptera Neoptera No 1
Dan-Mir-305 dan-mir-305 MIR-305 UUGUACU MIMAT0008464 None scaffold_12916 15334171 15334231 + Cryptovermes Cryptovermes No 1 1
Dan-Mir-284 dan-mir-284 MIR-284 UCAGCAA None MIMAT0008415 scaffold_12911 3308013 3308092 - Glossinidae + Drosophilidae Glossinidae + Drosophilidae No
Dan-Mir-282 dan-mir-282 MIR-282 AGCCUCU MIMAT0008445 None scaffold_13337 7556623 7556687 + Pancrustacea Pancrustacea No 1
Dan-Mir-281-P2 dan-mir-281-2 MIR-281 AGAGAGC MIMAT0009182 MIMAT0008429 scaffold_13266 2568952 2569020 + Drosophila Nephrozoa No 1
Dan-Mir-281-P1 V dan-mir-281-1 MIR-281 AAGAGAG MIMAT0008428 MIMAT0008429 scaffold_13266 2568766 2568828 + Drosophila Nephrozoa 2 No
Dan-Mir-279-P3 None MIR-279 GACUAGA None None scaffold_13340 14198981 14199044 - Pancrustacea Protostomia No 1 1
Dan-Mir-279-P2 dan-mir-279 MIR-279 GACUAGA None MIMAT0008454 scaffold_13340 14200323 14200386 - Pancrustacea Protostomia No 1
Dan-Mir-279-P1 dan-mir-286 MIR-279 GACUAGA None MIMAT0008444 scaffold_13266 9731371 9731449 + Pancrustacea Protostomia No 1
Dan-Mir-278 dan-mir-278 MIR-278 CGGAUGA None MIMAT0008470 scaffold_13266 12641349 12641409 - Bilateria Bilateria No 1
Dan-Mir-277 dan-mir-277 MIR-277 AAAUGCA None MIMAT0008407 scaffold_13340 6489013 6489076 + Protostomia Protostomia No 1
Dan-Mir-276-P2 dan-mir-276a MIR-276 GCGAGGU None MIMAT0008455 scaffold_13337 15274269 15274329 + Diptera Arthropoda No 1 1
Dan-Mir-276-P1 dan-mir-276b MIR-276 GCGAGGU None MIMAT0008446 scaffold_13337 15233400 15233461 + Diptera Arthropoda No 1
Dan-Mir-275 dan-mir-275 MIR-275 CAGGUAC None MIMAT0008451 scaffold_12916 15334009 15334068 + Arthropoda Arthropoda No 1
Dan-Mir-252-P2 V None MIR-252 UAAGUAC None None scaffold_13340 1848689 1848755 - Bilateria Bilateria 2 No 1
Dan-Mir-252-P1b None MIR-252 UAAGUAG None None scaffold_12943 1815419 1815480 - Drosophila Bilateria No 1
Dan-Mir-252-P1a None MIR-252 AAGUAGU None None scaffold_12943 1815568 1815630 - Drosophila Bilateria No 1
Dan-Mir-219 dan-mir-219 MIR-219 GAUUGUC MIMAT0008474 None scaffold_13337 8265367 8265428 + Bilateria Bilateria No 1
Dan-Mir-216-P2 dan-mir-304 MIR-216 AAUCUCA MIMAT0008413 None scaffold_12929 2899119 2899186 - Nephrozoa Nephrozoa No 1
Dan-Mir-216-P1 dan-mir-283 MIR-216 AAUAUCA MIMAT0008437 None scaffold_12929 2900402 2900470 - Nephrozoa Nephrozoa No 1
Dan-Mir-210 V dan-mir-210 MIR-210 UGUGCGU None MIMAT0008433 scaffold_13335 1604034 1604092 - Bilateria Bilateria 2 No
Dan-Mir-193-P1 V None MIR-193 GUUGGGA None None scaffold_13337 17070845 17070925 - Bilateria Bilateria 4 No 1
Dan-Mir-190 None MIR-190 GAUAUGU None None scaffold_13337 8074901 8074963 - Bilateria Bilateria No 1
Dan-Mir-184 dan-mir-184 MIR-184 GGACGGA MIMAT0008435 MIMAT0008436 scaffold_13266 16524598 16524658 - Nephrozoa Nephrozoa No 1
Dan-Mir-137 None MIR-137 AUUGCUU None None scaffold_13266 15447254 15447314 + Bilateria Bilateria No 1 1
Dan-Mir-133 dan-mir-133 MIR-133 UGGUCCC None MIMAT0008468 scaffold_12916 7117540 7117600 + Bilateria Bilateria No 1
Dan-Mir-124 dan-mir-124 MIR-124 AAGGCAC None MIMAT0008431 scaffold_12916 3309714 3309769 - Bilateria Bilateria No
Dan-Mir-96-P3 dan-mir-263a MIR-96 AUGGCAC MIMAT0008443 None scaffold_12943 2289727 2289789 + Bilateria Bilateria No 1
Dan-Mir-96-P2 dan-mir-263b MIR-96 UUGGCAC MIMAT0008447 None scaffold_13337 11320757 11320817 + Bilateria Bilateria No 1
Dan-Mir-92-P8 None MIR-92 AUUGCAC None None scaffold_13266 4132825 4132881 + Drosophila Bilateria No 1
Dan-Mir-92-P7 dan-mir-312 MIR-92 AUUGCAC None MIMAT0008422 scaffold_13266 4132688 4132749 + Drosophila Bilateria No 1
Dan-Mir-92-P6 dan-mir-311a MIR-92 AUUGCAC None MIMAT0008471 scaffold_13266 4132944 4133001 + Drosophila Bilateria No 1
Dan-Mir-92-P5 dan-mir-310 MIR-92 AUUGCAC None MIMAT0008425 scaffold_13266 4133064 4133125 + Drosophila Bilateria No
Dan-Mir-92-P4 dan-mir-92b MIR-92 AUUGCAC None MIMAT0008405 scaffold_13340 3732660 3732721 + Pancrustacea Bilateria No 1
Dan-Mir-92-P3 dan-mir-92a MIR-92 AUUGCAC None MIMAT0008412 scaffold_13340 3727792 3727850 + Pancrustacea Bilateria No 1
Dan-Mir-87-P2 V dan-mir-87 MIR-87 UGAGCAA None MIMAT0008411 scaffold_12916 13789788 13789859 - Protostomia Protostomia 2 No 1
Dan-Mir-76 None MIR-76 UCGUUGU None None scaffold_12929 1586961 1587024 + Nephrozoa Nephrozoa No 1
Dan-Mir-67 V dan-mir-307 MIR-67 CACAACC None MIMAT0008434 scaffold_13266 12795492 12795557 - Protostomia Protostomia 2 No 1
Dan-Mir-34 dan-mir-34 MIR-34 GGCAGUG MIMAT0008439 None scaffold_13340 6489998 6490072 + Bilateria Bilateria No
Dan-Mir-33 dan-mir-33 MIR-33 UGCAUUG MIMAT0008461 None scaffold_13337 19456811 19456871 - Bilateria Bilateria No 1 1
Dan-Mir-31-P2 dan-mir-31b MIR-31 GGCAAGA MIMAT0008469 None scaffold_13047 712447 712538 - Glossinidae + Drosophilidae Bilateria No
Dan-Mir-31-P1 dan-mir-31a MIR-31 GGCAAGA MIMAT0008477 None scaffold_13266 10515624 10515691 + Glossinidae + Drosophilidae Bilateria No 1
Dan-Mir-29-P2h None MIR-29 AGCACCA None None scaffold_13340 5676226 5676342 + Neoptera Bilateria No
Dan-Mir-29-P2g None MIR-29 AGCACCA None None scaffold_13340 13021693 13021752 - Neoptera Bilateria No 1
Dan-Mir-29-P1 dan-mir-285 MIR-29 AGCACCA None MIMAT0008419 scaffold_13337 6191364 6191437 - Bilateria Bilateria No 1
Dan-Mir-22-P2 None MIR-22 AGCUGCC None None scaffold_13117 4815211 4815276 - Bilateria Bilateria No 1
Dan-Mir-14 dan-mir-14 MIR-14 CAGUCUU None MIMAT0008460 scaffold_13266 183971 184029 - Neoptera Neoptera No 1 1
Dan-Mir-12 dan-mir-12 MIR-12 GAGUAUU MIMAT0008418 None scaffold_12929 2898590 2898653 - Protostomia Protostomia No 1
Dan-Mir-10-P4 None MIR-10 AAGCUCG None None scaffold_13340 5446749 5446840 - Protostomia Eumetazoa No 1
Dan-Mir-10-P3 dan-mir-125 MIR-10 CCCUGAG MIMAT0008473 None scaffold_12916 2379504 2379563 + Bilateria Eumetazoa No
Dan-Mir-10-P2 dan-mir-100 MIR-10 ACCCGUA MIMAT0008478 None scaffold_12916 2378782 2378842 + Bilateria Eumetazoa No
Dan-Mir-10-P1 dan-mir-10 MIR-10 CCCUGUA MIMAT0008476 None scaffold_13340 5417376 5417438 + Bilateria Eumetazoa No 1
Dan-Mir-9-P13 dan-mir-9b MIR-9 CUUUGGU MIMAT0008416 None scaffold_12916 15864555 15864614 - Neoptera Bilateria No 1 1
Dan-Mir-9-P12 V dan-mir-79 MIR-9 AAAGCUA None MIMAT0008430 scaffold_12916 15864734 15864795 - Neoptera Bilateria 2 No
Dan-Mir-9-P11 dan-mir-9c MIR-9 CUUUGGU MIMAT0008456 None scaffold_12916 15865484 15865553 - Neoptera Bilateria No 1
Dan-Mir-9-P10 dan-mir-9a MIR-9 CUUUGGU MIMAT0008458 None scaffold_13337 17332447 17332507 - Pancrustacea Bilateria No 1 1 1
Dan-Mir-9-P9 dan-mir-4 MIR-9 UAAAGCU None MIMAT0008427 scaffold_13266 9731536 9731592 + Pancrustacea Bilateria No 1
Dan-Mir-8 dan-mir-8 MIR-8 AAUACUG None MIMAT0008408 scaffold_13266 13876658 13876718 - Nephrozoa Nephrozoa No 1
Dan-Mir-7 dan-mir-7 MIR-7 GGAAGAC MIMAT0008410 None scaffold_13266 4109379 4109440 - Bilateria Bilateria No 1
Dan-Mir-3-P3 dan-mir-318 MIR-3 CACUGGG None MIMAT0008463 scaffold_13340 867217 867275 - Drosophila Pancrustacea No 1
Dan-Mir-3-P2 dan-mir-3 MIR-3 CACUGGG None MIMAT0008423 scaffold_13266 9731233 9731293 + Drosophila Pancrustacea No 1 1
Dan-Mir-3-P1 dan-mir-309 MIR-3 CACUGGG None MIMAT0008453 scaffold_13266 9731119 9731176 + Drosophila Pancrustacea No 1 1
Dan-Mir-2-P9 None MIR-2 UAAGGAA None None scaffold_13340 867382 867451 - Glossinidae + Drosophilidae Protostomia No
Dan-Mir-2-P8 dan-mir-308 MIR-2 GCAGUAU None MIMAT0008421 scaffold_13266 5819971 5820030 + Aparaglossata Protostomia No 1
Dan-Mir-2-P7 dan-mir-11 MIR-2 AUCACAG None MIMAT0008472 scaffold_13340 5675694 5675758 + Neoptera Protostomia No 1
Dan-Mir-2-P6c dan-mir-6-3 MIR-2 AUCACAG None MIMAT0008462 scaffold_13266 9732130 9732191 + Drosophila Protostomia No 1
Dan-Mir-2-P6b dan-mir-6-2 MIR-2 AUCACAG None MIMAT0008462 scaffold_13266 9731970 9732041 + Drosophila Protostomia No 1
Dan-Mir-2-P6a dan-mir-6-1 MIR-2 AUCACAG None MIMAT0008462 scaffold_13266 9731826 9731883 + Drosophila Protostomia No 1
Dan-Mir-2-P5 dan-mir-5 MIR-2 AAGGAAC MIMAT0008457 None scaffold_13266 9731684 9731747 + Pancrustacea Protostomia No
Dan-Mir-2-P4b V dan-mir-2a-2 MIR-2 AUCACAG None MIMAT0008414 scaffold_12916 12013993 12014052 + Glossinidae + Drosophilidae Protostomia 2 No
Dan-Mir-2-P4a V dan-mir-2a-1 MIR-2 AUCACAG None MIMAT0008414 scaffold_12916 12013671 12013735 + Glossinidae + Drosophilidae Protostomia 2 No 1
Dan-Mir-2-P3b dan-mir-2b MIR-2 AUCACAG None MIMAT0008417 scaffold_12916 12013322 12013390 + Glossinidae + Drosophilidae Protostomia Yes
Dan-Mir-2-P3a V None MIR-2 AUCACAG None None scaffold_12916 6006068 6006130 + Glossinidae + Drosophilidae Protostomia 2 No 1
Dan-Mir-2-P2b2 dan-mir-13b-2 MIR-2 AUCACAG None MIMAT0008426 scaffold_13047 797494 797554 + Drosophila Protostomia No 1
Dan-Mir-2-P2b1 dan-mir-13b-1 MIR-2 AUCACAG None MIMAT0008426 scaffold_13340 12827487 12827547 - Drosophila Protostomia No 1
Dan-Mir-2-P2a dan-mir-13a MIR-2 AUCACAG None MIMAT0008420 scaffold_13340 12827632 12827693 - Neoptera Protostomia No
Dan-Mir-2-P1 V dan-mir-2c MIR-2 CACAGCC None MIMAT0008442 scaffold_13340 12827849 12827913 - Arthropoda Protostomia 2 No
Dan-Mir-1 dan-mir-1 MIR-1 GGAAUGU None MIMAT0008432 scaffold_12916 6985839 6985899 + Bilateria Bilateria No 1
Dan-Let-7 dan-let-7 LET-7 GAGGUAG MIMAT0008467 None scaffold_12916 2379191 2379250 + Bilateria Bilateria No 1
Dan-Iab-4-as None IAB-4 UACGUAU None None scaffold_13340 7215208 7215267 + Pancrustacea Arthropoda No 1
Dan-Iab-4 dan-mir-iab-4 IAB-4 CGUAUAC MIMAT0008440 MIMAT0008441 scaffold_13340 7215208 7215264 - Arthropoda Arthropoda No 1 1
Dan-Bantam dan-bantam BANTAM GAGAUCA None MIMAT0008409 scaffold_13337 6520601 6520660 - Protostomia Protostomia No

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