MirGeneDB

MirGeneDB ID

Dan-Mir-8

Family name MIR-8 (all species)
Seed AAUACUG
Species Fruit fly (Drosophila ananassae)
MiRBase ID dan-mir-8
Paralogues
Orthologues Aae-Mir-8  Aca-Mir-8-P1a  Aca-Mir-8-P2a  Aca-Mir-8-P3a  Ami-Mir-8-P1a  Ami-Mir-8-P2a  Ami-Mir-8-P3a  Asu-Mir-8  Bfl-Mir-8-P1  Bfl-Mir-8-P2-v1  Bfl-Mir-8-P2-v2  Bfl-Mir-8-P3  Bge-Mir-8  Bta-Mir-8-P1a  Bta-Mir-8-P1b  Bta-Mir-8-P2a  Bta-Mir-8-P2b  Bta-Mir-8-P3a  Cbr-Mir-8  Cel-Mir-8  Cfa-Mir-8-P1a  Cfa-Mir-8-P1b  Cfa-Mir-8-P2a  Cfa-Mir-8-P2b  Cfa-Mir-8-P3a  Cgi-Mir-8  Cin-Mir-8-P1  Cin-Mir-8-P2  Cin-Mir-8-P2-as  Cli-Mir-8-P1a  Cli-Mir-8-P2a  Cli-Mir-8-P3a  Cpi-Mir-8-P1a  Cpi-Mir-8-P2a  Cpi-Mir-8-P3a  Cpo-Mir-8-P1a  Cpo-Mir-8-P1b  Cpo-Mir-8-P2a  Cpo-Mir-8-P2b  Cpo-Mir-8-P3a  Cte-Mir-8  Dme-Mir-8  Dmo-Mir-8  Dno-Mir-8-P1a  Dno-Mir-8-P1b  Dno-Mir-8-P2a  Dno-Mir-8-P3a  Dpu-Mir-8  Dre-Mir-8-P1a  Dre-Mir-8-P1b  Dre-Mir-8-P2a  Dre-Mir-8-P2b  Dre-Mir-8-P3a  Dre-Mir-8-P3b  Efe-Mir-8-P4  Efe-Mir-8-P5  Efe-Mir-8-P6  Ete-Mir-8-P1a  Ete-Mir-8-P1b  Ete-Mir-8-P2a  Ete-Mir-8-P2b  Ete-Mir-8-P3a  Gga-Mir-8-P1a  Gga-Mir-8-P2a  Gga-Mir-8-P3a  Hme-Mir-8  Hsa-Mir-8-P1a  Hsa-Mir-8-P1b  Hsa-Mir-8-P2a  Hsa-Mir-8-P2b  Hsa-Mir-8-P3a  Isc-Mir-8  Lan-Mir-8  Lgi-Mir-8  Mdo-Mir-8-P1a  Mdo-Mir-8-P1b  Mdo-Mir-8-P2a  Mdo-Mir-8-P2b  Mdo-Mir-8-P3a  Mml-Mir-8-P1a  Mml-Mir-8-P1b  Mml-Mir-8-P2a  Mml-Mir-8-P2b  Mml-Mir-8-P3a  Mmu-Mir-8-P1a  Mmu-Mir-8-P1b  Mmu-Mir-8-P2a  Mmu-Mir-8-P2b  Mmu-Mir-8-P3a  Oan-Mir-8-P1a  Oan-Mir-8-P1b  Oan-Mir-8-P2a  Oan-Mir-8-P2b  Oan-Mir-8-P3a  Ocu-Mir-8-P1a  Ocu-Mir-8-P1b  Ocu-Mir-8-P2a  Ocu-Mir-8-P2b  Ocu-Mir-8-P3a  Pfl-Mir-8  Pmi-Mir-8  Rno-Mir-8-P1a  Rno-Mir-8-P1b  Rno-Mir-8-P2a  Rno-Mir-8-P2b  Rno-Mir-8-P3a  Sha-Mir-8-P1a  Sha-Mir-8-P1b  Sha-Mir-8-P2a  Sha-Mir-8-P2b  Sha-Mir-8-P3a  Sko-Mir-8  Spu-Mir-8  Sto-Mir-8-P1a  Sto-Mir-8-P2a  Sto-Mir-8-P3a  Tgu-Mir-8-P1a  Tgu-Mir-8-P2a  Xtr-Mir-8-P1a  Xtr-Mir-8-P2a  Xtr-Mir-8-P3a 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Dana_caf1)
scaffold_13266: 13876658-13876718 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AUCUUGCUUAUUUGCAAGGACAUCUGUUCACAUCUUACCGGGCAGCAUUAGAUCCUUUCUGAUAACUCUAAUACUGUCAGGUAAAGAUGUCGUCCGUGUCCUUAACCAUCGGAAAGAAGGA
Get precursor sequence
Structure
        10           20        30         40        50         
AUCUUGCUUAUUUGCAA---|     CUGUUC       -   G     C      UCCUUU 
                    GGACAU      ACAUCUU ACC GGCAG AUUAGA      C
                    CCUGUG      UGUAGAA UGG CUGUC UAAUCU      U
AGGAAGAAAGGCUACCAAUU^     CCUGC-       A   A     A      CAAUAG 
 .       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Da
Star sequence

Dan-Mir-8_5p*

MirBase accessionNone
Sequence
0- CAUCUUACCGGGCAGCAUUAGA -22
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Mature sequence

Dan-Mir-8_3p

MirBase accessionMIMAT0008408
Sequence
38- UAAUACUGUCAGGUAAAGAUGUC -61
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