MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-8-P4

Family name MIR-8 (all species)
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-8-P5  Efe-Mir-8-P6 
Orthologues Aae-Mir-8  Aga-Mir-8  Agr-Mir-8  Asu-Mir-8  Bge-Mir-8  Bko-Mir-8  Bpl-Mir-8  Cbr-Mir-8  Cel-Mir-8  Csc-Mir-8  Cte-Mir-8  Dan-Mir-8  Dgr-Mir-8  Dlo-Mir-8  Dma-Mir-8  Dme-Mir-8  Dmo-Mir-8  Dpu-Mir-8  Dsi-Mir-8  Dya-Mir-8  Eba-Mir-8  Egr-Mir-8  Esc-Mir-8  Gpa-Mir-8  Gsa-Mir-8  Hme-Mir-8  Hru-Mir-8  Isc-Mir-8  Lan-Mir-8  Lgi-Mir-8  Lhy-Mir-8  Llo-Mir-8  Mgi-Mir-8  Mom-Mir-8  Npo-Mir-8  Obi-Mir-8  Ofu-Mir-8  Ovu-Mir-8  Pau-Mir-8  Pca-Mir-8  Pdu-Mir-8  Pfl-Mir-8  Pmi-Mir-8  Pve-Mir-8  Rph-Mir-8  Sko-Mir-8  Sma-Mir-8  Snu-Mir-8  Spu-Mir-8  Tca-Mir-8  Tur-Mir-8  War-Mir-8 
Node of Origin (locus) E. fetida
Node of Origin (family) Nephrozoa
Genome context
(Efe_combined)		 Efet.01.118063: 3502-3564 [-]
Seed AAUACUG
Precursor
(pre-Mir +30nt flank)		 
ACCUGCAUACGGCCGGCAUAUCUUUGAUGCCGUCUUACCUGGUAGUCUUAGGUGUCGCGUUUGUUAUGCCUAAUACUGUCAGGUAAAGAUGUCAGCUGGAUGUGCCUUCGUCAUACUUAAUAG
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Structure
        10           20        30         40        50        60
ACCUGCAUACGGCCGGC---|     UUGA  C      -     GU   C     UGUCGCG 
                    AUAUCU    UG CGUCUU ACCUG  AGU UUAGG       U
                    UGUAGG    AC GUAGAA UGGAC  UCA AAUCC       U
GAUAAUUCAUACUGCUUCCG^     UCG-  U      A     UG   U     GUAUUGU 
 120       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
To
Star sequence

Efe-Mir-8-P4_5p*
mirBase accessionNone
Sequence 
0- CGUCUUACCUGGUAGUCUUAGG -22
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Mature sequence

Efe-Mir-8-P4_3p
mirBase accessionNone
Sequence 
40- UAAUACUGUCAGGUAAAGAUGUC -63
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