MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-8-P5

Family name MIR-8 (all species)
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-8-P4  Efe-Mir-8-P6 
Orthologues Aae-Mir-8  Aga-Mir-8  Agr-Mir-8  Asu-Mir-8  Bge-Mir-8  Bko-Mir-8  Bpl-Mir-8  Cbr-Mir-8  Cel-Mir-8  Csc-Mir-8  Cte-Mir-8  Dan-Mir-8  Dgr-Mir-8  Dlo-Mir-8  Dma-Mir-8  Dme-Mir-8  Dmo-Mir-8  Dpu-Mir-8  Dsi-Mir-8  Dya-Mir-8  Eba-Mir-8  Egr-Mir-8  Esc-Mir-8  Gpa-Mir-8  Gsa-Mir-8  Hme-Mir-8  Hru-Mir-8  Isc-Mir-8  Lan-Mir-8  Lgi-Mir-8  Lhy-Mir-8  Llo-Mir-8  Mgi-Mir-8  Mom-Mir-8  Npo-Mir-8  Obi-Mir-8  Ofu-Mir-8  Ovu-Mir-8  Pau-Mir-8  Pca-Mir-8  Pdu-Mir-8  Pfl-Mir-8  Pmi-Mir-8  Pve-Mir-8  Rph-Mir-8  Sko-Mir-8  Sma-Mir-8  Snu-Mir-8  Spu-Mir-8  Tca-Mir-8  Tur-Mir-8  War-Mir-8 
Node of Origin (locus) E. fetida
Node of Origin (family) Nephrozoa
Genome context
(Efe_combined)		 Efet.01.600573: 521-584 [-]
Seed AAUACUG
Precursor
(pre-Mir +30nt flank)		 
CGAAGUGUCGUAUACAUGGGUCAGCGGCGUCAUCUUACCUGAUGGUAUUAGAGUGAUAUAAAGACGAUGUUUAAUACUGUCAGGUAAAGAUGUCGUCGCACCUGGCUAUCGUCAUCCUCACCGU
Get precursor sequence
Structure
        10            20        30         40        50        60 
CGAAGUGUCGUAUACAU----|   CA      U      -                GUGAUAUA 
                     GGGU  GCGGCG CAUCUU ACCUGAUGGUAUUAGA        \
                     UCCA  CGCUGC GUAGAA UGGACUGUCAUAAUUU        A
UGCCACUCCUACUGCUAUCGG^   --      U      A                GUAGCAGA 
  120       110       100          90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
- +
To
Star sequence

Efe-Mir-8-P5_5p* (predicted)
mirBase accessionNone
Sequence 
0- CAUCUUACCUGAUGGUAUUAGA -22
Get sequence
Mature sequence

Efe-Mir-8-P5_3p
mirBase accessionNone
Sequence 
41- UAAUACUGUCAGGUAAAGAUGUC -64
Get sequence