MirGeneDB 2.1
MirGeneDB ID

Dan-Mir-252-P1a

Family name MIR-252 (all species)
Seed AAGUAGU
Species Fruit fly (Drosophila ananassae)
MiRBase ID
Paralogues Dan-Mir-252-P1b  Dan-Mir-252-P2-v1  Dan-Mir-252-P2-v2 
Orthologues Asu-Mir-252-P1  Bfl-Mir-252-P1-v1  Bfl-Mir-252-P1-v2  Bge-Mir-252-P1  Bla-Mir-252-P1-v1  Bla-Mir-252-P1-v2  Cbr-Mir-252-P1  Cel-Mir-252-P1  Cgi-Mir-252-P1  Csc-Mir-252-P1  Cte-Mir-252-P1  Dma-Mir-252-P1-v1  Dma-Mir-252-P1-v2  Dme-Mir-252-P1a  Dmo-Mir-252-P1a  Dpu-Mir-252-P1  Dsi-Mir-252-P1a  Dya-Mir-252-P1a  Esc-Mir-252-P1  Hme-Mir-252-P1  Isc-Mir-252-P1  Lan-Mir-252-P1  Lgi-Mir-252-P1  Npo-Mir-252-P1  Obi-Mir-252-P1  Ovu-Mir-252-P1  Pfl-Mir-252-P1  Pmi-Mir-252-P1  Sko-Mir-252-P1  Spu-Mir-252-P1  Tca-Mir-252-P1 
Node of Origin (locus) Drosophila
Node of Origin (family) Bilateria
Genome context
(Dana_caf1)		 scaffold_12943: 1815568-1815630 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AGGUUGAAUCCUAAAUUAUGGCAGUUUCCUUAAGUAGUAUCCAUUAAAGGGUCGUUAAUAUAUUCAAAGUGACCGUUUGAUGUACUACUUUAGGUAGCUCCAUUUAAAGUCGGCUAAAAUAAG
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Structure
        10           20        30        40        50        60  
AGGUUGAAUCCUAAAUU---|   C    U   U        UC       G     UUAAUAU 
                    AUGG AGUU CCU AAGUAGUA  CAUUAAA GGUCG       \
                    UACC UCGA GGA UUCAUCAU  GUAGUUU CCAGU       A
GAAUAAAAUCGGCUGAAAUU^   -    U   U        --       G     GAAACUU 
 120       110       100         90          80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Da
Mature sequence

Dan-Mir-252-P1a_5p
mirBase accessionNone
Sequence 
0- UAAGUAGUAUCCAUUAAAGGGUCG -24
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Star sequence

Dan-Mir-252-P1a_3p*
mirBase accessionNone
Sequence 
41- ACCGUUUGAUGUACUACUUUAG -63
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