MirGeneDB 2.1

MirGeneDB ID

Ovu-Mir-252-P1

Family name MIR-252 (all species)
Seed UAAGUAG
Species Common octopus (Octopus vulgaris)
MiRBase ID
Paralogues
Orthologues Asu-Mir-252-P1  Bfl-Mir-252-P1-v1  Bfl-Mir-252-P1-v2  Bge-Mir-252-P1  Bla-Mir-252-P1-v1  Bla-Mir-252-P1-v2  Cbr-Mir-252-P1  Cel-Mir-252-P1  Cgi-Mir-252-P1  Csc-Mir-252-P1  Cte-Mir-252-P1  Dan-Mir-252-P1a  Dan-Mir-252-P1b  Dma-Mir-252-P1-v1  Dma-Mir-252-P1-v2  Dme-Mir-252-P1a  Dme-Mir-252-P1b  Dmo-Mir-252-P1a  Dmo-Mir-252-P1b  Dpu-Mir-252-P1  Dsi-Mir-252-P1a  Dsi-Mir-252-P1b  Dya-Mir-252-P1a  Dya-Mir-252-P1b  Esc-Mir-252-P1  Hme-Mir-252-P1  Isc-Mir-252-P1  Lan-Mir-252-P1  Lgi-Mir-252-P1  Lpo-Mir-252-P1c  Lpo-Mir-252-P1e  Lpo-Mir-252-P1f  Npo-Mir-252-P1  Obi-Mir-252-P1  Pfl-Mir-252-P1  Pmi-Mir-252-P1  Sko-Mir-252-P1  Spu-Mir-252-P1  Tca-Mir-252-P1  Xbo-Mir-252-P1g  Xbo-Mir-252-P1h  Xbo-Mir-252-P1i 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCA_003957725.1_ASM395772v1_OVU)
RXHP01011976.1: 72604-72661 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AUUAAAGAUUUGAAACAACCAAUAGCUAUAUUAAGUAGUGGUGCCGCAGGUAUUUACUGCCAGAUUACCUGCAUGUCACUACUUAAUGCUAGACUAUUUUGGUAAAACAUCAUCAGAC
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Structure
        10        20          30        40        50         
AUUAAAGAUUUGAAACAACC     -   -|           GU CC       UUUACU 
                    AAUAG CUA UAUUAAGUAGUG  G  GCAGGUA      \
                    UUAUC GAU GUAAUUCAUCAC  U  CGUCCAU      G
CAGACUACUACAAAAUGGUU     A   C^           UG A-       UAGACC 
      110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc Oc
Mature sequence

Ovu-Mir-252-P1_5p

mirBase accessionNone
Sequence
0- UUAAGUAGUGGUGCCGCAGGUA -22
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Star sequence

Ovu-Mir-252-P1_3p*

mirBase accessionNone
Sequence
37- CCUGCAUGUCACUACUUAAUG -58
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