| MirGeneDB ID | Dgr-Mir-252-P1 |
|---|---|
| Family name | MIR-252 (all species) |
| Species | Dimorphilus gyrociliatus (Dimorphilus gyrociliatus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Agr-Mir-252-P1 Asu-Mir-252-P1 Bfl-Mir-252-P1-v1 Bge-Mir-252-P1 Bla-Mir-252-P1-v1 Cbr-Mir-252-P1 Cel-Mir-252-P1 Csc-Mir-252-P1k Csc-Mir-252-P1l Cte-Mir-252-P1 Dan-Mir-252-P1a Dan-Mir-252-P1b Dlo-Mir-252-P1 Dma-Mir-252-P1 Dme-Mir-252-P1a Dme-Mir-252-P1b Dmo-Mir-252-P1a Dmo-Mir-252-P1b Dpu-Mir-252-P1 Dsi-Mir-252-P1a Dsi-Mir-252-P1b Dya-Mir-252-P1a Dya-Mir-252-P1b Eba-Mir-252-P1 Esc-Mir-252-P1 Hme-Mir-252-P1 Hmi-Mir-252-P1 Hru-Mir-252-P1 Isc-Mir-252-P1 Lan-Mir-252-P1 Lgi-Mir-252-P1 Lhy-Mir-252-P1 Llo-Mir-252-P1 Lpo-Mir-252-P1c Lpo-Mir-252-P1e Lpo-Mir-252-P1f Mgi-Mir-252-P1 Mom-Mir-252-P1 Npo-Mir-252-P1 Obi-Mir-252-P1 Ofu-Mir-252-P1 Ovu-Mir-252-P1 Pau-Mir-252-P1 Pca-Mir-252-P1 Pdu-Mir-252-P1 Pfl-Mir-252-P1 Pmi-Mir-252-P1 Rph-Mir-252-P1 Sko-Mir-252-P1 Snu-Mir-252-P1 Spu-Mir-252-P1 Sro-Mir-252-P1o1 Sro-Mir-252-P1o2 Tca-Mir-252-P1 Tur-Mir-252-P1 War-Mir-252-P1 Xbo-Mir-252-P1g Xbo-Mir-252-P1h Xbo-Mir-252-P1i Xbo-Mir-252-P1j |
| Node of Origin (locus) | Bilateria |
| Node of Origin (family) | Bilateria |
| Genome context (GCA_904063045.1_Dgyrociliatus) |
CAJFCJ010000027.1: 589745-589805 [-] |
| Clustered miRNAs (< 50kb from Mir-252-P1) |
Mir-252-P1
CAJFCJ010000027.1: 589745-589805 [-]
Mir-2001 CAJFCJ010000027.1: 591034-591101 [-] |
| Seed | UAAGUAG |
| Precursor (pre-Mir +30nt flank) |
GUAAAUUGGCGUUACAUGAUUAUCAGUGCAUUAAGUAGUAGUGCCGCAGGUGGCAAUUUACAAUUGGUCAACUGCUGUACUCUGCUUUUCUCACAGAUAAAUCGUAUCUACAAAAACGCCCGet precursor sequence |
| Structure | 10 20 30 40 50 60 GUAAAUUGGCGUUACAU- -| A CAUU U C G GCAAUUU GA UUAUC GUG AAGUAG AGUGC GCAG UG A CU AAUAG CAC UUCGUC UCAUG CGUC AC C CCCGCAAAAACAUCUAUG A^ A UCUU - U A UGGUUAA . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Mature sequence | Dgr-Mir-252-P1_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UUAAGUAGUAGUGCCGCAGGUG -22
Get sequence
|
| Star sequence | Dgr-Mir-252-P1_3p* (predicted) |
| mirBase accession | None |
| Sequence |
40- ACUGCUGUACUCUGCUUUUCU -61
Get sequence
|
