MirGeneDB 3.0
MirGeneDB ID

Dgr-Mir-2001

Family name MIR-2001 (all species)
Species Dimorphilus gyrociliatus (Dimorphilus gyrociliatus)
MiRBase ID
Paralogues
Orthologues Agr-Mir-2001  Bge-Mir-2001-P1  Bge-Mir-2001-P2  Cbr-Mir-2001  Cel-Mir-2001  Csc-Mir-2001  Cte-Mir-2001-v1  Dan-Mir-2001  Dlo-Mir-2001-v1  Dme-Mir-2001  Dmo-Mir-2001  Dsi-Mir-2001  Dya-Mir-2001  Eba-Mir-2001  Gpa-Mir-2001  Gsa-Mir-2001  Hme-Mir-2001  Hmi-Mir-2001  Hru-Mir-2001  Isc-Mir-2001  Lan-Mir-2001-P3  Lan-Mir-2001-P4  Lgi-Mir-2001  Lhy-Mir-2001  Llo-Mir-2001  Lpo-Mir-2001  Mgi-Mir-2001  Mom-Mir-2001  Npo-Mir-2001  Ofu-Mir-2001  Pau-Mir-2001  Pcr-Mir-2001  Pdu-Mir-2001  Pfl-Mir-2001  Pmi-Mir-2001  Pve-Mir-2001  Rph-Mir-2001  Sko-Mir-2001  Snu-Mir-2001  Spu-Mir-2001  Sro-Mir-2001  Tur-Mir-2001  War-Mir-2001  Xbo-Mir-2001 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCA_904063045.1_Dgyrociliatus)		 CAJFCJ010000027.1: 591034-591101 [-]
Clustered miRNAs
(< 50kb from Mir-2001)		 Mir-252-P1 CAJFCJ010000027.1: 589745-589805 [-]
Mir-2001 CAJFCJ010000027.1: 591034-591101 [-]
Seed UGUGACC
Precursor
(pre-Mir +30nt flank)		 
AACUGAACUUGAAACAUUUCAUUGGCCAACUUGUGACCGUUAUAAUGGGCAUUAACUGCUUAAAAAUAUGCGAAAUGUCCCUUGUAGCGUUCUCAAUUUGGACAACGAAAAUACUCAUCAAUAUAAAA
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Structure
        10          20        30        40        50        60   
AACUGAACUUGAAACAU--|  A   G    C   U  C        U     UUAACUGCUUA 
                   UUC UUG CCAA UUG GA CGUUAUAA GGGCA           A
                   AAG AAC GGUU AAC CU GCGAUGUU CCUGU           A
AAAAUAUAACUACUCAUAA^  C   A    U   U  U        C     AAAGCGUAUAA 
      120       110       100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Mature sequence

Dgr-Mir-2001_5p (predicted)
mirBase accessionNone
Sequence 
0- UUGUGACCGUUAUAAUGGGCA -21
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Star sequence

Dgr-Mir-2001_3p* (predicted)
mirBase accessionNone
Sequence 
47- UCCCUUGUAGCGUUCUCAAUU -68
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