MirGeneDB 3.0

45 microRNA genes of family MIR-2001

						Sort by genome coordinates								Motifs
MirGeneDB ID ▲	MiRBase ID	Family	Seed	5p accession	3p accession	Chromosome	Start	End	Strand	Node of origin (locus)	Node of origin (family)	Iso­miR	3' NTU	UG	UGUG	CNNC
Agr-Mir-2001	None	MIR-2001	UGUGACC	None	None	JABBOT010000001.1	47796802	47796859	-	Bilateria	Bilateria		Unknown			1
Cbr-Mir-2001	cbr-mir-360	MIR-2001	UGUGACC	None	MIMAT0001303	X	11259477	11259537	+	Bilateria	Bilateria		No
Cel-Mir-2001	cel-mir-360	MIR-2001	UGUGACC	MIMAT0015121	MIMAT0000702	chrX	5919174	5919235	+	Bilateria	Bilateria		No
Csc-Mir-2001	None	MIR-2001	UGUGACC	None	None	NW_019384413.1	874212	874272	+	Bilateria	Bilateria		No			1
Dan-Mir-2001	dan-mir-274	MIR-2001	UUGUGAC	MIMAT0008448	None	scaffold_13337	5918636	5918702	+	Bilateria	Bilateria		No	1
Dgr-Mir-2001	None	MIR-2001	UGUGACC	None	None	CAJFCJ010000027.1	591034	591101	-	Bilateria	Bilateria		Unknown			1
Dme-Mir-2001	dme-mir-274	MIR-2001	UUGUGAC	MIMAT0000332	MIMAT0020800	3L	11656937	11657002	+	Bilateria	Bilateria		No	1
Dmo-Mir-2001	dmo-mir-274	MIR-2001	UUGUGAC	MIMAT0008655	None	scaffold_6680	18485500	18485576	+	Bilateria	Bilateria		No	1		1
Dsi-Mir-2001	None	MIR-2001	UUGUGAC	None	None	3L	11358169	11358234	+	Bilateria	Bilateria		No	1
Dya-Mir-2001	None	MIR-2001	UUGUGAC	None	None	3L	11678655	11678720	+	Bilateria	Bilateria		No	1
Eba-Mir-2001	None	MIR-2001	UGUGACC	None	None	WURV02156569.1	3460	3519	+	Bilateria	Bilateria		Unknown			1
Gpa-Mir-2001	None	MIR-2001	UUGUGAC	None	None	Scaffold4	2050284	2050374	-	Bilateria	Bilateria		No	1
Gsa-Mir-2001	gsa-mir-2001	MIR-2001	UGUGACC	MIMAT0035280	MIMAT0035281	scf7180006951744	4739	4810	+	Bilateria	Bilateria		No			1
Hme-Mir-2001	None	MIR-2001	UUGUGAC	None	None	HE669201	27587	27644	-	Bilateria	Bilateria		No
Hmi-Mir-2001	None	MIR-2001	UGUGACC	None	None	SCFE01000006.1	3184949	3184999	+	Bilateria	Bilateria		Unknown
Hru-Mir-2001	None	MIR-2001	UGUGACC	None	None	JALGQA010000012.1	1918026	1918084	-	Bilateria	Bilateria		Unknown		1	1
Isc-Mir-2001	isc-mir-2001	MIR-2001	UGUGACC	MIMAT0009721	None	NW_024609884.1	42500086	42500147	+	Bilateria	Bilateria		No			1
Lgi-Mir-2001	lgi-mir-2001	MIR-2001	UGUGACC	MIMAT0009731	None	LOTGIsca_150	486301	486357	-	Bilateria	Bilateria		Unknown			1
Lhy-Mir-2001	None	MIR-2001	UGUGACC	None	None	scaffold54055_14.9	1899	1958	-	Bilateria	Bilateria		Unknown			1
Llo-Mir-2001	None	MIR-2001	UGUGACC	None	None	OU342997.1	3150196	3150254	+	Bilateria	Bilateria		Unknown
Lpo-Mir-2001	None	MIR-2001	UGUGACC	None	None	NW_013667319.1	181922	181978	-	Bilateria	Bilateria		No			1
Mgi-Mir-2001	None	MIR-2001	UUGUGAC	None	None	scaffold1366	96730	96789	+	Bilateria	Bilateria		No
Mom-Mir-2001	None	MIR-2001	UGUGACC	None	None	JARFOD010132739.1	22313	22372	+	Bilateria	Bilateria		Unknown
Npo-Mir-2001	None	MIR-2001	UGUGACC	None	None	JACATO010000601.1	22889	22948	+	Bilateria	Bilateria		Unknown		1	1
Ofu-Mir-2001	None	MIR-2001	UGUGACC	None	None	CAIIXF020000005.1	14833615	14833672	-	Bilateria	Bilateria		No	1
Pau-Mir-2001	None	MIR-2001	UGUGACC	None	None	NMRA01000092.1	873567	873625	+	Bilateria	Bilateria		Unknown			1
Pcr-Mir-2001	None	MIR-2001	UGUGACC	None	None	CAJQUW010000533.1	454272	454327	-	Bilateria	Bilateria		No			1
Pdu-Mir-2001	None	MIR-2001	UGUGACC	None	None	JAPTHN010000005.1	66483700	66483753	-	Bilateria	Bilateria		No		1	1
Pfl-Mir-2001	None	MIR-2001	UGUGACC	None	None	LD368470.1	38645	38714	+	Bilateria	Bilateria		No	1		1
Pmi-Mir-2001	pmi-mir-2001	MIR-2001	UGUGACC	MIMAT0032175	None	JH782853.1	10000	10059	-	Bilateria	Bilateria		No	1		1
Pve-Mir-2001	None	MIR-2001	UGUGACC	None	None	Pve_Chr8	529343510	529343568	+	Bilateria	Bilateria		Unknown		1	1
Rph-Mir-2001	None	MIR-2001	UUGUGAC	None	None	CM018525.1	43444147	43444207	-	Bilateria	Bilateria		No			1
Sko-Mir-2001	sko-mir-2001	MIR-2001	UGUGACC	MIMAT0009735	None	NW_003126934.1	20664	20731	-	Bilateria	Bilateria		Unknown			1
Snu-Mir-2001	None	MIR-2001	UGUGACC	None	None	CM049306.1	13254413	13254471	-	Bilateria	Bilateria		Unknown		1	1
Spu-Mir-2001	spu-mir-2001	MIR-2001	UGUGACC	MIMAT0009740	None	AAGJ06000015.1	468208	468268	+	Bilateria	Bilateria		No			1
Sro-Mir-2001	None	MIR-2001	UGUGACC	None	None	JANVAR010000765.1	132488	132565	-	Bilateria	Bilateria		No
Tur-Mir-2001	None	MIR-2001	UGUGACC	None	None	HE587309.1	1324887	1324960	+	Bilateria	Bilateria		No		1
War-Mir-2001	None	MIR-2001	UGUGACC	None	None	WNLI01179893.1	684	742	-	Bilateria	Bilateria		Unknown		1	1
Xbo-Mir-2001	None	MIR-2001	UGUGACC	None	None	scaffold836	44083	44141	-	Bilateria	Bilateria		No
Cte-Mir-2001 V	cte-mir-2001	MIR-2001	UGUGACC	MIMAT0009705	None	CAPTEscaffold_296	188020	188081	+	Bilateria	Bilateria	2	No			1
Dlo-Mir-2001 V	None	MIR-2001	UUGUGAC	None	None	NC_087225.1	53364	53421	+	Bilateria	Bilateria	2	Unknown	1		1
Bge-Mir-2001-P1	None	MIR-2001	UUGUGAC	None	None	KZ617672.1	125160	125225	-	B. germanica	Bilateria		Unknown			1
Bge-Mir-2001-P2	None	MIR-2001	UUGUGAC	None	None	JPZV02062146.1	270	335	-	B. germanica	Bilateria		Unknown			1
Lan-Mir-2001-P3	None	MIR-2001	UGUGACC	None	None	LFEI01000174	377902	377960	+	L. anatina	Bilateria		Unknown			1
Lan-Mir-2001-P4	None	MIR-2001	UGUGACC	None	None	LFEI01000195	453230	453288	-	L. anatina	Bilateria		Unknown			1

(red - mature/co-mature, blue - star)

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all