| MirGeneDB ID | Dan-Novel-1 |
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| Family name |
DAN-NOVEL-1 (all species) |
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| Seed |
UAGGUUU |
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| Species |
Fruit fly (Drosophila ananassae) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
D. ananassae
|
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| Node of Origin (family) |
D. ananassae
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Genome context
(Dana_caf1) |
scaffold_13335: 210604-210664 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GACGCAGAAAAAAAGAGGAGCUAGUUUCUUUGCCAUACUGCUCAAACUUAAUUUGUAUUUAAAAAAAUUAGGUUUGGUAGUAUUUGGCGAAAAAAAUUAGAUUCCGAAGCUACGGAGAGUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GACGCAGAAAAAAAGAGGAG- C- --| U UGUAU
CUAGUUU UUUGCCA UACUGC CAAACUUAAUU U
GAUUAAA AAGCGGU AUGAUG GUUUGGAUUAA U
AUGAGAGGCAUCGAAGCCUUA AA UU^ - AAAAA
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UGUG in loop |
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Tissue expression
|
|
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| Star sequence |
Dan-Novel-1_5p* |
| mirBase accession | None |
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| Sequence |
0- UGCCAUACUGCUCAAACUUAAUU -23
Get sequence
|
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| Mature sequence |
Dan-Novel-1_3p |
| mirBase accession | None |
|---|
| Sequence |
37- UUAGGUUUGGUAGUAUUUGGCGAA -61
Get sequence
|
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