| MirGeneDB ID | Dan-Novel-3 |
|---|
| Family name |
DAN-NOVEL-3 (all species) |
|---|
| Seed |
AUUUACA |
|---|
| Species |
Fruit fly (Drosophila ananassae) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
D. ananassae
|
|---|
| Node of Origin (family) |
D. ananassae
|
|---|
Genome context
(Dana_caf1) |
scaffold_13335: 210927-210985 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AAAUAUUGUAAAUAUAUAAUAAUUCUGUUUUCUGCUCGCUAGAUGUAAGUUGGAAGUUUUGAAGUCCUAUUUACAUUAGUAGGCAGAGAAUAAGAUUAUUACAUUCUACGAAAUAUAUG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AAAUAUUGUAAAUAUAU--| UC CG A U AAGUU
AAUAAU UGUUUUCUGCU CU GAUGUAAGU GG U
UUAUUA AUAAGAGACGG GA UUACAUUUA CC U
GUAUAUAAAGCAUCUUACA^ GA AU - U UGAAG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Dan-Novel-3_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- UCUGCUCGCUAGAUGUAAGUUGG -23
Get sequence
|
|---|
| Mature sequence |
Dan-Novel-3_3p |
| mirBase accession | None |
|---|
| Sequence |
37- UAUUUACAUUAGUAGGCAGAGA -59
Get sequence
|
|---|
