MirGeneDB 3.0
MirGeneDB ID

Dan-Novel-18

Family name DAN-NOVEL-18 (all species)
Species Fruit fly (Drosophila ananassae)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) D. ananassae
Node of Origin (family) D. ananassae
Genome context
(Dana_caf1)		 scaffold_12903: 534990-535045 [+] Ensembl
Clustered miRNAs
(< 50kb from Novel-18)		 Novel-18 scaffold_12903: 534990-535045 [+] Ensembl
Novel-19 scaffold_12903: 535322-535384 [+] Ensembl
Novel-20 scaffold_12903: 550138-550198 [+] Ensembl
Novel-13 scaffold_12903: 550268-550328 [+] Ensembl
Novel-4 scaffold_12903: 550400-550461 [+] Ensembl
Novel-5 scaffold_12903: 550549-550607 [+] Ensembl
Novel-6 scaffold_12903: 550718-550780 [+] Ensembl
Novel-7 scaffold_12903: 554769-554835 [+] Ensembl
Novel-8 scaffold_12903: 555085-555146 [+] Ensembl
Novel-9 scaffold_12903: 558880-558937 [+] Ensembl
Novel-10 scaffold_12903: 559716-559778 [+] Ensembl
Seed ACUUUGA
Precursor
(pre-Mir +30nt flank)		 
AUAUUAAAUAUUACUUAGUCUCUUUUCAUUUACUUUGAGUAAUGUUUGUAUUGUAUUUUCUAAAUACAUUCUUUAUUCCAAGUAGAUGAAGUGAUUUUCGAUCAUCAGUUGAAAUA
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Structure
        10        20          30        40        50       
AUAUUAAAUAUUACUUAGUC--| U            U      UGUU      GUAU 
                      UC UUUCAUUUACUU GAGUAA    UGUAUU    U
                      AG GAAGUAGAUGAA CUUAUU    ACAUAA    U
AUAAAGUUGACUACUAGCUUUU^ U            C      UCUU      AUCU 
    110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Fe
Mature sequence

Dan-Novel-18_5p
mirBase accessionNone
Sequence 
0- UACUUUGAGUAAUGUUUGUAUU -22
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Co-mature sequence

Dan-Novel-18_3p
mirBase accessionNone
Sequence 
34- UACAUUCUUUAUUCCAAGUAGA -56
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