MirGeneDB 2.1

MirGeneDB ID

Dan-Novel-9

Family name DAN-NOVEL-9 (all species)
Seed AUGAGAA
Species Fruit fly (Drosophila ananassae)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) D. ananassae
Node of Origin (family) D. ananassae
Genome context
(Dana_caf1)
scaffold_12903: 558880-558937 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUUAUUUUCAGUGCCUAGAAUUACUUAUUUUAUGAGAAGUUCUUGGGCCAGUGUUGUAUCUGAUCAUUGAUCCAUUUGCUUCUCACAUACAAGUAAUUUCUUCAGCCUCAUUAAGUGA
Get precursor sequence
Structure
        10          20        30        40        50         
UUUAUUUUCAGUGCCUA--|        AUUUUA        UCU   GC     UUGUA 
                   GAAUUACUU      UGAGAAGU   UGG  CAGUG     \
                   UUUAAUGAA      ACUCUUCG   ACC  GUUAC     U
AGUGAAUUACUCCGACUUC^        CAUAC-        UUU   UA     UAGUC 
      110       100        90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Da
Mature sequence

Dan-Novel-9_5p

mirBase accessionNone
Sequence
0- UAUGAGAAGUUCUUGGGCCAGUG -23
Get sequence
Star sequence

Dan-Novel-9_3p*

mirBase accessionNone
Sequence
36- UUGAUCCAUUUGCUUCUCACAU -58
Get sequence