| MirGeneDB ID | Dan-Novel-17 |
|---|
| Family name |
DAN-NOVEL-17 (all species) |
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| Species |
Fruit fly (Drosophila ananassae) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
D. ananassae
|
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| Node of Origin (family) |
D. ananassae
|
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Genome context
(Dana_caf1) |
scaffold_13340: 7931528-7931586 [+]
Ensembl
|
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| Seed |
AUUUUGG |
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Precursor
(pre-Mir +30nt flank) |
CUAGCCGCCUUCUCUCCAAUGAGGGCUUCGCAUUUUGGACAUUCUGCUUUCAAUUCCCGCGGAACUGAAAGCCUAAUGCCCAGAAAGCGAGGCCUCCAUUGUAGAGAAUGCGGCUAGAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CUAGCCGCCUUCUCUCC--| AG A A CU AUUCCC
AAUG GGCUUCGC UUUUGG CAUU GCUUUCA \
UUAC CCGGAGCG AAGACC GUAA CGAAAGU G
GAGAUCGGCGUAAGAGAUG^ CU A C UC CAAGGC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Dan-Novel-17_5p |
| mirBase accession | None |
|---|
| Sequence |
0- CAUUUUGGACAUUCUGCUUUCA -22
Get sequence
|
|---|
| Co-mature sequence |
Dan-Novel-17_3p |
| mirBase accession | None |
|---|
| Sequence |
37- AAAGCCUAAUGCCCAGAAAGCG -59
Get sequence
|
|---|
