| MirGeneDB ID | Dan-Novel-11 |
|---|
| Family name |
DAN-NOVEL-11 (all species) |
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| Species |
Fruit fly (Drosophila ananassae) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
|
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| Node of Origin (locus) |
D. ananassae
|
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| Node of Origin (family) |
D. ananassae
|
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Genome context
(Dana_caf1) |
scaffold_12929: 3159781-3159857 [+]
Ensembl
|
|---|
| Seed |
AAGCAGU |
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Precursor
(pre-Mir +30nt flank) |
UUUCGGUUUUUUUUUUUCUUUUGGAAUUCAGAUAUUUUUCCAUUCGUUUUGGUGGGUGACAGCUGUUUGUUGGUUUGAAGAACGCCAAAGCAGUGGGAAAAUCUCUGAAUAUUGAAAGCGACAAGCGGCAAGCUCCC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UUUCGGUUUUUUUUUUU--| UG A U C UGGGUGACAGCUGUU
CUUU G AUUCAGA AUUUUUCCAUU GUUUUGG U
GAAA U UAAGUCU UAAAAGGGUGA CGAAACC G
CCCUCGAACGGCGAACAGC^ GU A C - GCAAGAAGUUUGGUU
130 120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Dan-Novel-11_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- GAUAUUUUUCCAUUCGUUUUGG -22
Get sequence
|
|---|
| Mature sequence |
Dan-Novel-11_3p |
| mirBase accession | None |
|---|
| Sequence |
56- AAAGCAGUGGGAAAAUCUCUG -77
Get sequence
|
|---|
