| MirGeneDB ID | Dan-Mir-957 |
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| Family name |
MIR-957 (all species) |
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| Species |
Fruit fly (Drosophila ananassae) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Aae-Mir-957
Aga-Mir-957
Dme-Mir-957
Dmo-Mir-957
Dsi-Mir-957
Dya-Mir-957-P1
Dya-Mir-957-P2
Gpa-Mir-957
|
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| Node of Origin (locus) |
Diptera
|
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| Node of Origin (family) |
Diptera
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Genome context
(Dana_caf1) |
scaffold_13337: 22247699-22247766 [-]
Ensembl
|
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| Seed |
GAAACCG |
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Precursor
(pre-Mir +30nt flank) |
AUAUAGUAAUAUAUACUGCCUACAAUGGCCCUUAGUUUUCGACGUGUUUUGGUGUGCAGGGGAGUUCUAUUCCGAUUGAAACCGUCCAAAACUGAGGCCAACUGUGAGGCGUGAGCAUCUAAAAAUUA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
AUAUAGUAAUAUAUACU- - A-| C C U UG GUGCAGGGGA
GCCU ACA UGGCC UUAGUUUU GACG GUUU GU \
CGGA UGU ACCGG AGUCAAAA CUGC CAAA UA G
AUUAAAAAUCUACGAGUG G CA^ - C - GU GCCUUAUCUU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17), UGUG in loop |
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Tissue expression
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|
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| Star sequence |
Dan-Mir-957_5p* |
| mirBase accession | None |
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| Sequence |
0- CUUAGUUUUCGACGUGUUUUGGU -23
Get sequence
|
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| Mature sequence |
Dan-Mir-957_3p |
| mirBase accession | None |
|---|
| Sequence |
46- UGAAACCGUCCAAAACUGAGGC -68
Get sequence
|
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