MirGeneDB 2.1

MirGeneDB ID

Dya-Mir-957-P1

Family name MIR-957 (all species)
Seed GAAACCG
Species Fruit fly (Drosophila yakuba)
MiRBase ID
Paralogues Dya-Mir-957-P2 
Orthologues Aae-Mir-957  Dan-Mir-957  Dme-Mir-957  Dmo-Mir-957  Dsi-Mir-957 
Node of Origin (locus) D. yakuba
Node of Origin (family) Diptera
Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel)
3L: 22973881-22973948 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUCAUAUCCGUAGUGUUGUCCACAAUAGACCUUAGUUUUCGACGUGUUUUGGUGUGCUGGGGAGUUAUAUUCCGAUUGAAACCGUCCAAAACUGAGGCCAACUGUGAGGCGUGAGCAACUAUCCAAAC
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Structure
        10         20         30        40        50        60    
AUCAUAUCCGUAGUGUU-   -|   AUAGA          C    U    UG  GUGCUGGGGA 
                  GUC CACA     CCUUAGUUUU GACG GUUU  GU          \
                  CGG GUGU     GGAGUCAAAA CUGC CAAA  UA          G
CAAACCUAUCAACGAGUG   A^   CAACC          C    -    GU  GCCUUAUAUU 
      120       110       100        90         80        70
Deep sequencing
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CommentThere is a single snp between the mirbase entry and this entry.
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
 +
He Wh
Star sequence

Dya-Mir-957-P1_5p*

mirBase accessionNone
Sequence
0- CUUAGUUUUCGACGUGUUUUGGU -23
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Mature sequence

Dya-Mir-957-P1_3p

mirBase accessionNone
Sequence
46- UGAAACCGUCCAAAACUGAGGC -68
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