MirGeneDB 2.1
MirGeneDB ID

Pma-Mir-34-P3

Family name MIR-34 (all species)
Seed GGCAGUG
Species Sea Lamprey (Petromyzon marinus)
MiRBase ID
Paralogues Pma-Mir-34-P1 
Orthologues Aae-Mir-34  Aca-Mir-34-P3a  Aca-Mir-34-P3c  Aca-Mir-34-P3d  Ami-Mir-34-P3a  Ami-Mir-34-P3b  Ami-Mir-34-P3c  Ami-Mir-34-P3d  Asu-Mir-34  Bge-Mir-34  Bta-Mir-34-P3a  Bta-Mir-34-P3b  Bta-Mir-34-P3c  Cbr-Mir-34  Cel-Mir-34  Cfa-Mir-34-P3b  Cfa-Mir-34-P3c  Cgi-Mir-34  Cin-Mir-34  Cli-Mir-34-P3a  Cli-Mir-34-P3b  Cli-Mir-34-P3c  Cli-Mir-34-P3d  Cmi-Mir-34-P3a  Cmi-Mir-34-P3b  Cmi-Mir-34-P3c  Cmi-Mir-34-P3d  Cpi-Mir-34-P3a  Cpi-Mir-34-P3b  Cpi-Mir-34-P3c  Cpi-Mir-34-P3d  Cpo-Mir-34-P3a  Cpo-Mir-34-P3c  Cte-Mir-34  Dan-Mir-34  Dma-Mir-34  Dme-Mir-34  Dmo-Mir-34  Dno-Mir-34-P3a  Dno-Mir-34-P3c  Dpu-Mir-34  Dsi-Mir-34  Dya-Mir-34  Efe-Mir-34  Esc-Mir-34  Ete-Mir-34-P3b  Ete-Mir-34-P3c  Gga-Mir-34-P3a  Gga-Mir-34-P3b  Gga-Mir-34-P3c  Gga-Mir-34-P3d  Gja-Mir-34-P3a  Gja-Mir-34-P3b  Gja-Mir-34-P3c  Gja-Mir-34-P3d  Gmo-Mir-34-P3c  Gmo-Mir-34-P3d  Hsa-Mir-34-P3a-v1  Hsa-Mir-34-P3a-v2  Hsa-Mir-34-P3b  Hsa-Mir-34-P3c  Isc-Mir-34  Lch-Mir-34-P3a  Lch-Mir-34-P3b  Lch-Mir-34-P3d  Lgi-Mir-34  Loc-Mir-34-P3a  Loc-Mir-34-P3b  Loc-Mir-34-P3c  Loc-Mir-34-P3d  Mal-Mir-34-P3c  Mal-Mir-34-P3d  Mdo-Mir-34-P3b  Mdo-Mir-34-P3c  Mdo-Mir-34-P3d  Mml-Mir-34-P3b  Mml-Mir-34-P3c  Mmu-Mir-34-P3a  Mmu-Mir-34-P3b  Mmu-Mir-34-P3c  Mun-Mir-34-P3a  Mun-Mir-34-P3d  Npo-Mir-34  Oan-Mir-34-P3a  Oan-Mir-34-P3b  Oan-Mir-34-P3c  Obi-Mir-34  Ocu-Mir-34-P3a  Ocu-Mir-34-P3b  Ocu-Mir-34-P3c  Ovu-Mir-34  Pbv-Mir-34-P3a  Pbv-Mir-34-P3b  Pbv-Mir-34-P3c  Pbv-Mir-34-P3d  Pfl-Mir-34  Pmi-Mir-34  Rno-Mir-34-P3a  Rno-Mir-34-P3b  Rno-Mir-34-P3c  Sha-Mir-34-P3b  Sha-Mir-34-P3c  Sha-Mir-34-P3d  Sko-Mir-34  Spt-Mir-34-P3b  Spt-Mir-34-P3c  Spt-Mir-34-P3d  Spu-Mir-34  Sto-Mir-34-P3a  Sto-Mir-34-P3b  Sto-Mir-34-P3c  Sto-Mir-34-P3d  Tca-Mir-34  Tgu-Mir-34-P3a  Tgu-Mir-34-P3c  Tgu-Mir-34-P3d  Tni-Mir-34-P3c  Xbo-Mir-34  Xla-Mir-34-P3a1  Xla-Mir-34-P3a2  Xla-Mir-34-P3b1  Xla-Mir-34-P3b2  Xla-Mir-34-P3c1  Xla-Mir-34-P3c2  Xla-Mir-34-P3d1  Xla-Mir-34-P3d2  Xtr-Mir-34-P3a  Xtr-Mir-34-P3b  Xtr-Mir-34-P3c  Xtr-Mir-34-P3d 
Node of Origin (locus) Vertebrata
Node of Origin (family) Bilateria
Genome context
(GCF_010993605.1_kPetMar1.pri_genomic)		 NC_046069.1: 12486898-12486963 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUGGUGGUGAGUGGCCCACGUGUUGGGAUGGGGCAGUGUAAUGUUAGCUGGACGCGCGUGAUCACGAACCGGCCCCAGCUGAUAUUCACUUCCUCAUUCCGGCAUCGAAAGAGCAGCACCGAACCU
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Structure
        10         20         30        40        50        60   
GUGGUGGUGAGUGGCCCA-  -|            C    U            ACGCGCGUGAU 
                   CG UGUUGGGAUGGGG AGUG AAUGUUAGCUGG           \
                   GC ACGGCCUUACUCC UCAC UUAUAGUCGACC           C
UCCAAGCCACGACGAGAAA  U^            U    -            CCGGCCAAGCA 
    120       110       100        90         80        70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Gi Gu He Ki La Li Mo Mu Sk
Mature sequence

Pma-Mir-34-P3_5p
mirBase accessionNone
Sequence 
0- GGGCAGUGUAAUGUUAGCUGGA -22
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Star sequence

Pma-Mir-34-P3_3p*
mirBase accessionNone
Sequence 
45- CAGCUGAUAUUCACUUCCUCA -66
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