MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-34-P3c

Family name MIR-34 (all species)
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-449a
Paralogues Gga-Mir-34-P1  Gga-Mir-34-P2a  Gga-Mir-34-P2b  Gga-Mir-34-P3a  Gga-Mir-34-P3b  Gga-Mir-34-P3d 
Orthologues Aae-Mir-34  Aca-Mir-34-P3c  Aga-Mir-34  Agr-Mir-34  Ami-Mir-34-P3c  Asu-Mir-34  Bge-Mir-34  Bta-Mir-34-P3c  Cbr-Mir-34  Cel-Mir-34  Cfa-Mir-34-P3c  Cin-Mir-34  Cja-Mir-34-P3c  Cli-Mir-34-P3c  Cmi-Mir-34-P3c  Cpi-Mir-34-P3c  Cpo-Mir-34-P3c  Cte-Mir-34  Dan-Mir-34  Dlo-Mir-34  Dma-Mir-34  Dme-Mir-34  Dmo-Mir-34  Dno-Mir-34-P3c  Dpu-Mir-34  Dsi-Mir-34  Dya-Mir-34  Eca-Mir-34-P3c  Efe-Mir-34  Esc-Mir-34  Ete-Mir-34-P3c  Gja-Mir-34-P3c  Gmo-Mir-34-P3c  Gpa-Mir-34  Gsp-Mir-34  Hmi-Mir-34  Hru-Mir-34  Hsa-Mir-34-P3c  Isc-Mir-34  Laf-Mir-34-P3c  Lgi-Mir-34  Lhy-Mir-34  Llo-Mir-34  Loc-Mir-34-P3c  Mal-Mir-34-P3c  Mdo-Mir-34-P3c  Mgi-Mir-34  Mml-Mir-34-P3c  Mmr-Mir-34-P3c  Mmu-Mir-34-P3c  Mom-Mir-34  Neu-Mir-34-P3c  Npo-Mir-34  Oan-Mir-34-P3c  Obi-Mir-34  Ocu-Mir-34-P3c  Ofu-Mir-34  Ovu-Mir-34  Pab-Mir-34-P3c  Pau-Mir-34  Pbv-Mir-34-P3c  Pca-Mir-34  Pdu-Mir-34  Pfl-Mir-34  Pma-Mir-34-P3  Pmi-Mir-34  Pve-Mir-34  Rno-Mir-34-P3c  Rph-Mir-34  Sha-Mir-34-P3c  Sko-Mir-34  Snu-Mir-34  Spt-Mir-34-P3c  Spu-Mir-34  Sto-Mir-34-P3c  Tca-Mir-34  Tgu-Mir-34-P3c  Tni-Mir-34-P3c  Tur-Mir-34  War-Mir-34  Xla-Mir-34-P3c1  Xla-Mir-34-P3c2  Xtr-Mir-34-P3c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(Gallus_gallus.GRCg6a)		 Z: 16702892-16702949 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-34-P3c)		 Mir-34-P3d Z: 16702024-16702082 [-] UCSC Ensembl
Mir-34-P3c Z: 16702892-16702949 [-] UCSC Ensembl
Mir-34-P3b Z: 16703052-16703110 [-] UCSC Ensembl
Mir-34-P3a Z: 16704036-16704097 [-] UCSC Ensembl
Seed GGCAGUG
Precursor
(pre-Mir +30nt flank)		 
GUGCAGGGAGUGCCUCUGUGUGCGGUGGGGUGGCAGUGUAUGUUAGCUGGUUGAAACUCUUGACAUCAGCUAACACGCAGUUGCUAACCUGCUCCACAUACCUUUAGCAUCAAACUGG
Get precursor sequence
Structure
        10          20        30         40        50        
GUGCAGGGAGUGCCUCU--     C  UG  G      -| UA           UGAAAC 
                   GUGUG GG  GG UGGCAG UG  UGUUAGCUGGU      \
                   UACAC UC  CC AUCGUU AC  ACAAUCGACUA      U
GGUCAAACUACGAUUUCCA     C  GU  A      G^ GC           CAGUUC 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Mature sequence

Gga-Mir-34-P3c_5p
mirBase accessionMIMAT0003372
Sequence 
0- UGGCAGUGUAUGUUAGCUGGUU -22
Get sequence
Proposed targets TargetScanVert: gga-miR-449a
miRDB: MIMAT0003372
Star sequence

Gga-Mir-34-P3c_3p*
mirBase accessionNone
Sequence 
35- UCAGCUAACACGCAGUUGCUAAC -58
Get sequence