MirGeneDB 2.1
MirGeneDB ID

Mal-Mir-34-P3c

Family name MIR-34 (all species)
Seed GGCAGUG
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-34-P1  Mal-Mir-34-P3d 
Orthologues Aae-Mir-34  Aca-Mir-34-P3c  Ami-Mir-34-P3c  Asu-Mir-34  Bge-Mir-34  Bta-Mir-34-P3c  Cbr-Mir-34  Cel-Mir-34  Cfa-Mir-34-P3c  Cgi-Mir-34  Cin-Mir-34  Cli-Mir-34-P3c  Cmi-Mir-34-P3c  Cpi-Mir-34-P3c  Cpo-Mir-34-P3c  Cte-Mir-34  Dan-Mir-34  Dma-Mir-34  Dme-Mir-34  Dmo-Mir-34  Dno-Mir-34-P3c  Dpu-Mir-34  Dsi-Mir-34  Dya-Mir-34  Efe-Mir-34  Esc-Mir-34  Ete-Mir-34-P3c  Gga-Mir-34-P3c  Gja-Mir-34-P3c  Gmo-Mir-34-P3c  Hsa-Mir-34-P3c  Isc-Mir-34  Lgi-Mir-34  Loc-Mir-34-P3c  Mdo-Mir-34-P3c  Mml-Mir-34-P3c  Mmu-Mir-34-P3c  Npo-Mir-34  Oan-Mir-34-P3c  Obi-Mir-34  Ocu-Mir-34-P3c  Ovu-Mir-34  Pbv-Mir-34-P3c  Pfl-Mir-34  Pma-Mir-34-P3  Pmi-Mir-34  Rno-Mir-34-P3c  Sha-Mir-34-P3c  Sko-Mir-34  Spt-Mir-34-P3c  Spu-Mir-34  Sto-Mir-34-P3c  Tca-Mir-34  Tgu-Mir-34-P3c  Tni-Mir-34-P3c  Xbo-Mir-34  Xla-Mir-34-P3c1  Xla-Mir-34-P3c2  Xtr-Mir-34-P3c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884708.1: 3842543-3842598 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGUAGGCCUCCGAGUUGUGGCUGGUUGGGAGGCAGUGUAAUGUUAGCUGAUGUAUCUACUGCCAGCUCACAAUGCUCUGCUACCUUAACAGCUACACUGGACUAUACCUGAAAUU
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Structure
        10           20        30        40        50       
CAGUAGGCCUCCGAGUU---|      GUU   A     U   A   U     AUGUAU 
                    GUGGCUG   GGG GGCAG GUA UGU AGCUG      \
                    CAUCGAC   UCC UCGUC CGU ACA UCGAC      C
UUAAAGUCCAUAUCAGGUCA^      AAU   A     U   A   C     CGUCAU 
    110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), UGUG in loop
Tissue expression
-   +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-34-P3c_5p
mirBase accessionNone
Sequence 
0- AGGCAGUGUAAUGUUAGCUGA -21
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Star sequence

Mal-Mir-34-P3c_3p*
mirBase accessionNone
Sequence 
34- AGCUCACAAUGCUCUGCUACCU -56
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