Mir
Gene
DB
2.1
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89 microRNA genes with seed GACUAGA
Sort by genome coordinates
Motifs
MirGeneDB ID
MiRBase ID
Family
Seed
5p accession
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
▼
Node of origin (family)
3' NTU
UG
UGUG
CNNC
Dmo-Mir-279-P1
dmo-mir-279
MIR-279
GACUAGA
None
MIMAT0008682
scaffold_6540
26447152
26447218
+
Diptera
Protostomia
No
1
Aae-Mir-279-P1
aae-mir-279
MIR-279
GACUAGA
None
MIMAT0014288
supercont1.437
572258
572322
-
Diptera
Protostomia
No
1
Dme-Mir-279-P1
dme-mir-279
MIR-279
GACUAGA
MIMAT0020807
MIMAT0000341
3R
29215606
29215672
+
Diptera
Protostomia
No
1
Dsi-Mir-279-P1
dsi-mir-279
MIR-279
GACUAGA
None
MIMAT0008896
3R
24399683
24399749
+
Diptera
Protostomia
No
1
Dya-Mir-279-P1
dya-mir-279
MIR-279
GACUAGA
None
MIMAT0009062
3R
21456064
21456130
-
Diptera
Protostomia
No
1
Dan-Mir-279-P1
dan-mir-279
MIR-279
GACUAGA
None
MIMAT0008454
scaffold_13340
14200323
14200386
-
Diptera
Protostomia
No
1
Dmo-Mir-279-P2
dmo-mir-286
MIR-279
GACUAGA
None
MIMAT0008643
scaffold_6496
20936799
20936877
-
Diptera
Protostomia
No
1
Dme-Mir-279-P2
dme-mir-286
MIR-279
GACUAGA
MIMAT0020820
MIMAT0000359
2R
19661435
19661509
-
Diptera
Protostomia
No
1
Dsi-Mir-279-P2
dsi-mir-286
MIR-279
GACUAGA
None
MIMAT0008859
2R
16151283
16151358
-
Diptera
Protostomia
No
1
Dya-Mir-279-P2
dya-mir-286
MIR-279
GACUAGA
None
MIMAT0009109
2R
13623775
13623848
+
Diptera
Protostomia
No
1
Dan-Mir-279-P2
dan-mir-286
MIR-279
GACUAGA
None
MIMAT0008444
scaffold_13266
9731371
9731449
+
Diptera
Protostomia
No
1
Dmo-Mir-279-P3
None
MIR-279
GACUAGA
None
None
scaffold_6540
26449303
26449366
+
Diptera
Protostomia
No
Aae-Mir-279-P3
aae-mir-996
MIR-279
GACUAGA
None
MIMAT0014251
supercont1.437
567506
567574
-
Diptera
Protostomia
No
1
Dme-Mir-279-P3
dme-mir-996
MIR-279
GACUAGA
MIMAT0020895
MIMAT0005515
3R
29217202
29217265
+
Diptera
Protostomia
No
1
1
Dsi-Mir-279-P3
None
MIR-279
GACUAGA
None
None
3R
24401284
24401347
+
Diptera
Protostomia
No
1
1
Dya-Mir-279-P3
None
MIR-279
GACUAGA
None
None
3R
21454444
21454507
-
Diptera
Protostomia
No
1
1
Dan-Mir-279-P3
None
MIR-279
GACUAGA
None
None
scaffold_13340
14198981
14199044
-
Diptera
Protostomia
No
1
1
Aae-Mir-279-o26
aae-mir-2945
MIR-279
GACUAGA
MIMAT0014315
MIMAT0014316
supercont1.43
958696
958759
+
A. aegypti
Protostomia
No
1
Aae-Mir-279-P2a
aae-mir-286a
MIR-279
GACUAGA
None
MIMAT0014314
supercont1.464
825007
825079
+
A. aegypti
Protostomia
Unknown
1
Aae-Mir-279-P2b1
aae-mir-286b-1
MIR-279
GACUAGA
None
MIMAT0014313
supercont1.602
93485
93563
+
A. aegypti
Protostomia
No
Aae-Mir-279-P2b2
aae-mir-286b-2
MIR-279
GACUAGA
None
MIMAT0014313
supercont1.150
907335
907413
+
A. aegypti
Protostomia
No
Hme-Mir-279-o32
hme-mir-279b
MIR-279
GACUAGA
None
MIMAT0024964
HE670979
5122
5178
-
H. melpomene
Protostomia
No
1
1
Hme-Mir-279-o33
hme-mir-279d
MIR-279
GACUAGA
None
MIMAT0024965
HE670979
4653
4713
-
H. melpomene
Protostomia
No
1
Hme-Mir-279-o34
hme-mir-279c
MIR-279
GACUAGA
None
MIMAT0024966
HE671887
111974
112030
+
H. melpomene
Protostomia
No
1
1
Hme-Mir-279-o31
hme-mir-279a
MIR-279
GACUAGA
None
MIMAT0024961
HE668381
19337
19392
-
H. melpomene
Protostomia
No
1
Tca-Mir-279-o21
tca-mir-279a
MIR-279
GACUAGA
MIMAT0019125
MIMAT0008383
LG7
8213635
8213695
-
T. castaneum
Protostomia
No
1
Tca-Mir-279-o22
tca-mir-279b
MIR-279
GACUAGA
MIMAT0019181
MIMAT0010201
LG5
444013
444072
+
T. castaneum
Protostomia
No
Tca-Mir-279-o23
tca-mir-279c
MIR-279
GACUAGA
MIMAT0018730
MIMAT0018731
LG3
15690069
15690126
+
T. castaneum
Protostomia
No
1
Tca-Mir-279-o24
tca-mir-279d
MIR-279
GGCGAUU
MIMAT0018788
MIMAT0018789
LG7
8213507
8213566
-
T. castaneum
Protostomia
No
1
Tca-Mir-279-o25
tca-mir-279e
MIR-279
GACUAGA
MIMAT0018816
MIMAT0018817
LG9
11214
11274
-
T. castaneum
Protostomia
No
1
Bge-Mir-279-o35
None
MIR-279
ACGGAUG
None
None
KZ614498.1
736091
736150
-
B. germanica
Protostomia
No
1
Bge-Mir-279-o36
None
MIR-279
GACUAGA
None
None
KZ614507.1
1095704
1095765
-
B. germanica
Protostomia
No
Bge-Mir-279-o37
None
MIR-279
GACUAGA
None
None
KZ614992.1
536335
536392
-
B. germanica
Protostomia
No
1
Bge-Mir-279-o38
None
MIR-279
GACUAGA
None
None
KZ614992.1
537892
537951
-
B. germanica
Protostomia
No
1
1
Bge-Mir-279-o39
None
MIR-279
GACUAGA
None
None
KZ615200.1
181846
181905
-
B. germanica
Protostomia
No
1
Dpu-Mir-279-o1
None
MIR-279
GACUAGA
None
None
DAPPUscaffold_32
69703
69769
-
Daphnia
Protostomia
No
1
Dma-Mir-279-o1
None
MIR-279
GACUAGA
None
None
NC_046175.1
6287015
6287090
-
Daphnia
Protostomia
No
1
1
Dpu-Mir-279-o2
dpu-mir-279b
MIR-279
GACUAGA
None
MIMAT0018923
DAPPUscaffold_32
68663
68726
-
Daphnia
Protostomia
No
1
Dma-Mir-279-o2
None
MIR-279
GACUAGA
None
None
NC_046175.1
6285937
6286000
-
Daphnia
Protostomia
No
1
Dpu-Mir-279-o3
None
MIR-279
GACUAGA
None
None
DAPPUscaffold_43
177095
177172
+
Daphnia
Protostomia
No
1
Dma-Mir-279-o3
None
MIR-279
GACUAGA
None
None
NC_046174.1
9091292
9091368
+
Daphnia
Protostomia
No
1
Dpu-Mir-279-o4
dpu-mir-279a
MIR-279
GACUAGA
None
MIMAT0012654
DAPPUscaffold_43
177501
177567
+
Daphnia
Protostomia
No
1
1
Dma-Mir-279-o4
None
MIR-279
GACUAGA
None
None
NC_046174.1
9091763
9091828
+
Daphnia
Protostomia
No
1
1
Dpu-Mir-279-o5
None
MIR-279
GACUAGA
None
None
DAPPUscaffold_62
283702
283760
-
Daphnia
Protostomia
No
1
1
1
Dma-Mir-279-o5
None
MIR-279
GACUAGA
None
None
NC_046179.1
204663
204723
-
Daphnia
Protostomia
No
1
1
Dpu-Mir-279-o6
None
MIR-279
GACUAGA
None
None
DAPPUscaffold_63
523653
523745
-
Daphnia
Protostomia
No
Dma-Mir-279-o6
None
MIR-279
GACUAGA
None
None
NC_046182.1
2914774
2914845
+
Daphnia
Protostomia
No
Csc-Mir-279-P14a
None
MIR-279
GACUAGA
None
None
NW_019384435.1
45082
45138
-
C. sculpturatus
Protostomia
Unknown
1
Csc-Mir-279-P14b
None
MIR-279
GACUAGA
None
None
NW_019384435.1
37483
37539
-
C. sculpturatus
Protostomia
Unknown
1
Lpo-Mir-279-P9
None
MIR-279
GACUAGA
None
None
NW_013666709.1
211951
212009
+
L. polyphemus
Protostomia
No
1
Lpo-Mir-279-P10
None
MIR-279
GACUAGA
None
None
NW_013668157.1
101725
101783
+
L. polyphemus
Protostomia
No
1
Lpo-Mir-279-P11
None
MIR-279
GACUAGA
None
None
NW_013666253.1
358370
358428
+
L. polyphemus
Protostomia
No
1
1
Lpo-Mir-279-P12
None
MIR-279
GACUAGA
None
None
NW_013671891.1
16421
16479
+
L. polyphemus
Protostomia
No
1
1
1
Lpo-Mir-279-P13
None
MIR-279
GACUAGA
None
None
NW_013670263.1
51426
51484
-
L. polyphemus
Protostomia
No
1
Cel-Mir-279-o7
cel-mir-44
MIR-279
GACUAGA
MIMAT0020771
MIMAT0000015
chrII
11890038
11890103
+
Caenorhabditis
Protostomia
No
Cbr-Mir-279-o7
cbr-mir-44
MIR-279
GACUAGA
None
MIMAT0000469
II
8891068
8891135
-
Caenorhabditis
Protostomia
No
Cel-Mir-279-o8
cel-mir-45
MIR-279
GACUAGA
MIMAT0020772
MIMAT0000016
chrII
11880959
11881025
-
Caenorhabditis
Protostomia
No
Cel-Mir-279-o9
cel-mir-61
MIR-279
GACUAGA
MIMAT0015103
MIMAT0000033
chrV
11770076
11770132
-
Caenorhabditis
Protostomia
No
1
Cbr-Mir-279-o9
cbr-mir-61
MIR-279
GACUAGA
None
MIMAT0001302
V
9339608
9339664
-
Caenorhabditis
Protostomia
No
Cel-Mir-279-o10
cel-mir-247
MIR-279
GACUAGA
MIMAT0015119
MIMAT0000303
chrX
4756991
4757052
+
Caenorhabditis
Protostomia
No
Cbr-Mir-279-o10
cbr-mir-247
MIR-279
GAGUUCA
None
MIMAT0029605
X
10093683
10093743
+
Caenorhabditis
Protostomia
No
Cbr-Mir-279-o8a
cbr-mir-45-1
MIR-279
GACUAGA
None
MIMAT0000470
II
8900359
8900424
-
C. briggsae
Protostomia
No
Cbr-Mir-279-o8b
cbr-mir-45-2
MIR-279
GACUAGA
None
MIMAT0000470
II
8903154
8903219
+
C. briggsae
Protostomia
No
Asu-Mir-279-o26
asu-mir-44a
MIR-279
GACUAGA
MIMAT0021455
MIMAT0021456
Scaffold800
97897
97956
-
A. suum
Protostomia
No
Asu-Mir-279-o28
asu-mir-279a
MIR-279
GACUAGA
MIMAT0021511
MIMAT0021512
Scaffold287
267836
267891
-
A. suum
Protostomia
No
1
1
Asu-Mir-279-o29
asu-mir-279b
MIR-279
GACUAGA
MIMAT0021513
MIMAT0021514
Scaffold1765
14642
14699
+
A. suum
Protostomia
No
Asu-Mir-279-o30
asu-mir-279c
MIR-279
GACUAGA
MIMAT0021515
MIMAT0021516
Scaffold919
52254
52311
+
A. suum
Protostomia
No
1
Cte-Mir-279-o11
cte-mir-279
MIR-279
GACUAGA
None
MIMAT0009539
CAPTEscaffold_19
703521
703582
-
C. teleta
Protostomia
No
1
Cte-Mir-279-o12
cte-mir-996
MIR-279
GACUAGA
None
MIMAT0013552
CAPTEscaffold_39
146002
146056
+
C. teleta
Protostomia
No
1
1
1
Cte-Mir-279-o13
cte-mir-2720
MIR-279
GACUAGA
MIMAT0013554
MIMAT0013555
CAPTEscaffold_39
146223
146291
+
C. teleta
Protostomia
No
1
1
Efe-Mir-279-o14
None
MIR-279
GACUAGA
None
None
Efet.01.179746
5176
5236
+
E. fetida
Protostomia
No
Efe-Mir-279-o15
None
MIR-279
GACUAGA
None
None
Efet.01.199475
1965
2030
-
E. fetida
Protostomia
No
1
Efe-Mir-279-o16
None
MIR-279
GACUAGA
None
None
Efet.01.229038
770
830
-
E. fetida
Protostomia
No
1
Efe-Mir-279-o17
None
MIR-279
GACUAGA
None
None
Efet.01.77336
1798
1860
+
E. fetida
Protostomia
No
1
Efe-Mir-279-o18
None
MIR-279
GACUAGA
None
None
Efet.01.1630742
220
281
-
E. fetida
Protostomia
No
1
1
Efe-Mir-279-o19
None
MIR-279
GACUAGA
None
None
Efet.01.388011
41
103
+
E. fetida
Protostomia
No
1
Efe-Mir-279-o20
None
MIR-279
GACUAGA
None
None
Efet.01.1381559
71
129
-
E. fetida
Protostomia
No
Lan-Mir-279-o40
None
MIR-279
GACUAGA
None
None
LFEI01000429
180847
180903
+
L. anatina
Protostomia
No
Lan-Mir-279-o41
None
MIR-279
GACUAGA
None
None
LFEI01000639
187098
187154
-
L. anatina
Protostomia
No
Sme-Mir-279-P4
sme-mir-61a
MIR-279
GACUAGA
MIMAT0012105
MIMAT0003983
NNSW01000252_dd_Smes_g4_252
319043
319099
-
S. mediterranea
Protostomia
No
1
Sme-Mir-279-P5
sme-mir-61b
MIR-279
GACUAGA
MIMAT0012132
MIMAT0011227
NNSW01000037_dd_Smes_g4_37
4595299
4595354
-
S. mediterranea
Protostomia
No
1
Cgi-Mir-279
None
MIR-279
GACUAGA
None
None
scaffold43988
13126
13181
-
Protostomia
Protostomia
No
1
1
Npo-Mir-279
None
MIR-279
GACUAGA
None
None
JACATO010000310.1
2271
2328
-
Protostomia
Protostomia
Unknown
1
Esc-Mir-279
None
MIR-279
GACUAGA
None
None
Esc-Mir-279_pre_SRIE01038885.1:207140-207401
101
162
+
Protostomia
Protostomia
No
1
Obi-Mir-279
None
MIR-279
GACUAGA
None
None
KQ419452
275218
275282
+
Protostomia
Protostomia
No
1
1
Ovu-Mir-279
None
MIR-279
GACUAGA
None
None
RXHP01026523.1
137402
137466
+
Protostomia
Protostomia
No
1
1
Isc-Mir-279
isc-mir-279
MIR-279
GACUAGA
None
MIMAT0012694
DS634011
38521
38578
+
Protostomia
Protostomia
No
1
Bpl-Mir-279
None
MIR-279
GACUAGA
None
None
QEOQ01000658.1
377113
377175
-
Protostomia
Protostomia
No
Lgi-Mir-279
lgi-mir-279
MIR-279
GACUAGA
None
MIMAT0009593
LOTGIsca_70
133228
133287
-
Protostomia
Protostomia
No
1
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