MirGeneDB 2.1
MirGeneDB ID

Dmo-Mir-279-P1

Family name MIR-279 (all species)
Seed GACUAGA
Species Fruit fly (Drosophila mojavensis)
MiRBase ID dmo-mir-279
Paralogues Dmo-Mir-279-P2  Dmo-Mir-279-P3 
Orthologues Aae-Mir-279-P1  Bpl-Mir-279  Cgi-Mir-279  Dan-Mir-279-P1  Dma-Mir-279-o1  Dme-Mir-279-P1  Dpu-Mir-279-o1  Dsi-Mir-279-P1  Dya-Mir-279-P1  Esc-Mir-279  Isc-Mir-279  Lgi-Mir-279  Npo-Mir-279  Obi-Mir-279  Ovu-Mir-279 
Node of Origin (locus) Diptera
Node of Origin (family) Protostomia
Genome context
(Dmoj_caf1)		 scaffold_6540: 26447152-26447218 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUCUGAUCGGAAAUACGUACUACUGUUUUUAGUGAGUGAGGGUCCAGUGUUUCACAUUGUUUGCUUAAGUAUUUGUGACUAGAUCCACACUCAUUAAAAACGGUAGUUCAAUCUGCGUGAAAUAUUU
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Structure
        10          20        30        40        50        60     
UUCUGAUCGGAAAUACGU--|                   A     C  UGUU     UUGUUUGC 
                    ACUACUGUUUUUAGUGAGUG GGGUC AG    UCACA        \
                    UGAUGGCAAAAAUUACUCAC CCUAG UC    AGUGU        U
UUUAUAAAGUGCGUCUAACU^                   A     A  ----     UUAUGAAU 
     120       110       100        90        80            70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Em Fe Ma Ma
Star sequence

Dmo-Mir-279-P1_5p*
mirBase accessionNone
Sequence 
0- AGUGAGUGAGGGUCCAGUGUUUCACA -26
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Mature sequence

Dmo-Mir-279-P1_3p
mirBase accessionMIMAT0008682
Sequence 
45- UGACUAGAUCCACACUCAUUAA -67
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