MirGeneDB 2.1
MirGeneDB ID

Hme-Mir-279-o31

Family name MIR-279 (all species)
Seed GACUAGA
Species Longwing butterfly (Heliconius melpomene)
MiRBase ID hme-mir-279a
Paralogues Hme-Mir-279-o32  Hme-Mir-279-o33  Hme-Mir-279-o34 
Orthologues Bpl-Mir-279  Cgi-Mir-279  Esc-Mir-279  Isc-Mir-279  Lgi-Mir-279  Npo-Mir-279  Obi-Mir-279  Ovu-Mir-279 
Node of Origin (locus) H. melpomene
Node of Origin (family) Protostomia
Genome context
(Hmel_1)		 HE668381: 19337-19392 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UGCGGCCGCCGCCAAAGGUCAAUUUCUUUCGAUGAGUGGAGGUUUAGUGCAUGUUUCCACAUCAUGACUAGAUCCACACUCAUCCAUGGAAGUUGCGAUGUUCGUCGAGGCCACAA
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Structure
        10           20        30        40        50        
UGCGGCCGCCGCCAAAG---|U        UUC        GA        G    UUUC 
                    G CAAUUUCU   GAUGAGUG  GGUUUAGU CAUG    \
                    C GUUGAAGG   CUACUCAC  CUAGAUCA GUAC    C
AACACCGGAGCUGCUUGUAG^-        UAC        AC        -    UACA 
    110       100         90        80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Fe Fe Fe Fe Ma Ma
Star sequence

Hme-Mir-279-o31_5p*
mirBase accessionNone
Sequence 
0- GAUGAGUGGAGGUUUAGUGCAUG -23
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Mature sequence

Hme-Mir-279-o31_3p
mirBase accessionMIMAT0024961
Sequence 
34- UGACUAGAUCCACACUCAUCCA -56
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