MirGeneDB 3.0
MirGeneDB ID

Xbo-Mir-103

Family name MIR-103 (all species)
Species Xenoturbella (Xenoturbella bocki)
MiRBase ID xbo-mir-2013
Paralogues
Orthologues Aca-Mir-103-P1  Aca-Mir-103-P2  Aca-Mir-103-P4  Ami-Mir-103-P1  Ami-Mir-103-P2  Ami-Mir-103-P4  Bfl-Mir-103-P5  Bfl-Mir-103-P6  Bfl-Mir-103-P7  Bfl-Mir-103-P8  Bla-Mir-103-P5  Bla-Mir-103-P6  Bla-Mir-103-P7  Bla-Mir-103-P8  Bta-Mir-103-P1  Bta-Mir-103-P2  Bta-Mir-103-P4  Cfa-Mir-103-P1  Cfa-Mir-103-P2  Cfa-Mir-103-P4  Cja-Mir-103-P1  Cja-Mir-103-P2  Cja-Mir-103-P4  Cli-Mir-103-P1  Cli-Mir-103-P2  Cli-Mir-103-P4  Cmi-Mir-103-P1  Cmi-Mir-103-P2  Cmi-Mir-103-P4  Cpi-Mir-103-P1  Cpi-Mir-103-P2  Cpi-Mir-103-P4  Cpo-Mir-103-P1  Cpo-Mir-103-P2  Cpo-Mir-103-P4  Dno-Mir-103-P1  Dno-Mir-103-P2  Dno-Mir-103-P4  Dre-Mir-103-P1a  Dre-Mir-103-P1b  Dre-Mir-103-P2a  Dre-Mir-103-P2b  Eca-Mir-103-P1  Eca-Mir-103-P2  Eca-Mir-103-P4  Ete-Mir-103-P1  Ete-Mir-103-P2  Ete-Mir-103-P4  Gga-Mir-103-P1  Gga-Mir-103-P2  Gga-Mir-103-P4  Gja-Mir-103-P1  Gja-Mir-103-P2  Gja-Mir-103-P4  Gmo-Mir-103-P2a  Gmo-Mir-103-P2b  Hmi-Mir-103  Hsa-Mir-103-P1  Hsa-Mir-103-P2  Hsa-Mir-103-P4  Laf-Mir-103-P1  Laf-Mir-103-P2  Laf-Mir-103-P4  Lch-Mir-103-P1  Lch-Mir-103-P2  Lch-Mir-103-P4  Loc-Mir-103-P1  Loc-Mir-103-P2  Loc-Mir-103-P4  Mal-Mir-103-P1a  Mal-Mir-103-P2a  Mal-Mir-103-P2b  Mdo-Mir-103-P1  Mdo-Mir-103-P2  Mdo-Mir-103-P4  Mml-Mir-103-P1  Mml-Mir-103-P2  Mml-Mir-103-P4  Mmr-Mir-103-P1  Mmr-Mir-103-P2  Mmr-Mir-103-P4  Mmu-Mir-103-P1  Mmu-Mir-103-P2  Mmu-Mir-103-P4  Mun-Mir-103-P1  Mun-Mir-103-P2  Mun-Mir-103-P4  Neu-Mir-103-P2  Neu-Mir-103-P4  Oan-Mir-103-P1  Oan-Mir-103-P2  Oan-Mir-103-P4  Ocu-Mir-103-P1  Ocu-Mir-103-P2  Ocu-Mir-103-P4  Pab-Mir-103-P1  Pab-Mir-103-P2  Pab-Mir-103-P4  Pbv-Mir-103-P1  Pbv-Mir-103-P2  Pbv-Mir-103-P4  Pfl-Mir-103  Pma-Mir-103-o1  Pma-Mir-103-o2  Pmi-Mir-103  Rno-Mir-103-P1  Rno-Mir-103-P2  Rno-Mir-103-P4  Sha-Mir-103-P1  Sha-Mir-103-P2  Sha-Mir-103-P4  Sko-Mir-103  Spt-Mir-103-P1  Spt-Mir-103-P2  Spt-Mir-103-P4  Spu-Mir-103  Sro-Mir-103  Sto-Mir-103-P1  Sto-Mir-103-P2  Sto-Mir-103-P4  Tgu-Mir-103-P1  Tgu-Mir-103-P2  Tgu-Mir-103-P4  Tni-Mir-103-P1a  Tni-Mir-103-P2a  Tni-Mir-103-P2b  Xla-Mir-103-P1c  Xla-Mir-103-P1d  Xla-Mir-103-P2c  Xla-Mir-103-P2d  Xla-Mir-103-P4  Xtr-Mir-103-P1  Xtr-Mir-103-P2  Xtr-Mir-103-P4 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(genome.xe)		 scaffold9008: 359-418 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-103)		 Mir-103 scaffold9008: 359-418 [+] UCSC Ensembl
Novel-10 scaffold9008: 686-745 [+] UCSC Ensembl
Seed GCAGCAU
Precursor
(pre-Mir +30nt flank)		 
UGUGCGUGCAUGCGCGUGGGUGGUGUUUGACGUCAUUGCAAUAUGCGUGCAUUUUAUCCAAUGUUUGAUGCAGCAUAUUGCAGUGGUGUCGAAAACCAUCUUUCUUCAUCAGACCCUGUC
Get precursor sequence
Structure
        10          20        30        40        50          
UGUGCGUGCAUGCGCGU--|      G      GU             G      UUAUCC 
                   GGGUGGU UUUGAC  CAUUGCAAUAUGC UGCAUU      \
                   UCUACCA AAGCUG  GUGACGUUAUACG ACGUAG      A
CUGUCCCAGACUACUUCUU^      A      UG             -      UUUGUA 
.       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
To To To
Star sequence

Xbo-Mir-103_5p*
mirBase accessionNone
Sequence 
0- CGUCAUUGCAAUAUGCGUGCAUU -23
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Mature sequence

Xbo-Mir-103_3p
mirBase accessionMIMAT0020119
Sequence 
38- UGCAGCAUAUUGCAGUGGUGUC -60
Get sequence