Mir-103-P4

MirGeneDB ID

Mml-Mir-103-P4

Family name

MIR-103 (all species)

Species

Rhesus monkey (Macaca mulatta)

MiRBase ID

mml-mir-103-1

Paralogues

Mml-Mir-103-P1 Mml-Mir-103-P2

Orthologues

Aca-Mir-103-P4 Ami-Mir-103-P4 Bta-Mir-103-P4 Cfa-Mir-103-P4 Cja-Mir-103-P4 Cli-Mir-103-P4 Cmi-Mir-103-P4 Cpi-Mir-103-P4 Cpo-Mir-103-P4 Dno-Mir-103-P4 Eca-Mir-103-P4 Ete-Mir-103-P4 Gga-Mir-103-P4 Gja-Mir-103-P4 Hmi-Mir-103 Hsa-Mir-103-P4 Laf-Mir-103-P4 Lch-Mir-103-P4 Loc-Mir-103-P4 Mdo-Mir-103-P4 Mmr-Mir-103-P4 Mmu-Mir-103-P4 Mun-Mir-103-P4 Neu-Mir-103-P4 Oan-Mir-103-P4 Ocu-Mir-103-P4 Pab-Mir-103-P4 Pbv-Mir-103-P4 Pfl-Mir-103 Pmi-Mir-103 Rno-Mir-103-P4 Sha-Mir-103-P4 Sko-Mir-103 Spt-Mir-103-P4 Spu-Mir-103 Sro-Mir-103 Sto-Mir-103-P4 Tgu-Mir-103-P4 Xbo-Mir-103 Xla-Mir-103-P4 Xtr-Mir-103-P4

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Bilateria

Genome context
(GCA_003339765.3_Mmul_10_traces)

CM014341.1: 165954319-165954378 [-] UCSC Ensembl

Seed

GCAGCAU

Precursor
(pre-Mir +30nt flank)

GAAAUUCUUGGAAGUUUUCUUACUGCCCUCGGCUUCUUUACAGUGCUGCCUUGUUGCAUAUGGAUCAAGCAGCAUUGUACAGGGCUAUGAAGGCAUUGAGACCUGUUCUUCAUGAUAUUU

Get precursor sequence

Structure

        10          20        30          40        50         
GAAAUUCUUGGAAGUUU--     C    C  --|   U  U           C   UUGCA 
                   UCUUA UGCC UC  GGCU CU UACAGUGCUGC UUG     U
                   AGAGU ACGG AG  UCGG GA AUGUUACGACG AAC     A
UUUAUAGUACUUCUUGUCC     U    A  UA^   -  C           -   UAGGU 
.       110       100        90         80        70         60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Bo	Br	Br	Br	He	Ki	Li	Lu	Ly	Sk	Sp	Te	Th

Star sequence

Mml-Mir-103-P4_5p*

mirBase accession

MIMAT0026582

Sequence

0- GGCUUCUUUACAGUGCUGCCUUG -23

Get sequence

Proposed targets

TargetScanVert: mml-miR-103-5p

Mature sequence

Mml-Mir-103-P4_3p

mirBase accession

MIMAT0002447

Sequence

37- AGCAGCAUUGUACAGGGCUAUGA -60

Get sequence

Proposed targets

TargetScanVert: mml-miR-103-3p