Mir-103-P4

MirGeneDB ID

Mmu-Mir-103-P4

Family name

MIR-103 (all species)

Seed

GCAGCAU

Species

House mouse (Mus musculus)

MiRBase ID

mmu-mir-103-1

Paralogues

Mmu-Mir-103-P1 Mmu-Mir-103-P2

Orthologues

Aca-Mir-103-P4 Ami-Mir-103-P4 Bta-Mir-103-P4 Cfa-Mir-103-P4 Cli-Mir-103-P4 Cmi-Mir-103-P4 Cpi-Mir-103-P4 Cpo-Mir-103-P4 Dno-Mir-103-P4 Ete-Mir-103-P4 Gga-Mir-103-P4 Gja-Mir-103-P4 Hsa-Mir-103-P4 Lch-Mir-103-P4 Loc-Mir-103-P4 Mdo-Mir-103-P4 Mml-Mir-103-P4 Mun-Mir-103-P4 Oan-Mir-103-P4 Ocu-Mir-103-P4 Pbv-Mir-103-P4 Pfl-Mir-103 Pmi-Mir-103 Rno-Mir-103-P4 Sha-Mir-103-P4 Sko-Mir-103 Spt-Mir-103-P4 Spu-Mir-103 Sto-Mir-103-P4 Tgu-Mir-103-P4 Xbo-Mir-103 Xla-Mir-103-P4 Xtr-Mir-103-P4

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Deuterostomia

Genome context
(mm10)

chr11: 35782410-35782469 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

AAGAUGCUUGGAAGUUUUCUUACUGCCCUCGGCUUCUUUACAGUGCUGCCUUGUUGCAUAUGGAUCAAGCAGCAUUGUACAGGGCUAUGAAGGCAUUGAGACUUGUUCUUCAUGCGGUUU

Get precursor sequence

Structure

        10          20        30          40        50         
AAGAUGCUUGGAAGUUU--     C    C  --|   U  U           C   UUGCA 
                   UCUUA UGCC UC  GGCU CU UACAGUGCUGC UUG     U
                   AGAGU ACGG AG  UCGG GA AUGUUACGACG AAC     A
UUUGGCGUACUUCUUGUUC     U    A  UA^   -  C           -   UAGGU 
.       110       100        90         80        70         60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Bo	Br	Br	Ce	Em	Em	He	In	Ki	Li	Lu	Mu	Ov	Pa	Sk	Sp	Sp	Te

Star sequence

Mmu-Mir-103-P4_5p*

mirBase accession

MIMAT0017024

Sequence

0- GGCUUCUUUACAGUGCUGCCUUG -23

Get sequence

Proposed targets

TargetScanVert: mmu-miR-103-1-5p
miRDB: MIMAT0017024

Mature sequence

Mmu-Mir-103-P4_3p

mirBase accession

MIMAT0000546

Sequence

37- AGCAGCAUUGUACAGGGCUAUGA -60

Get sequence

Proposed targets

microrna.org: MIMAT0000546
TargetScanVert: mmu-miR-103-3p
miRDB: MIMAT0000546