MirGeneDB 2.1
MirGeneDB ID

Ami-Mir-103-P4

Family name MIR-103 (all species)
Seed GCAGCAU
Species American alligator (Alligator mississippiensis)
MiRBase ID ami-mir-103
Paralogues Ami-Mir-103-P1  Ami-Mir-103-P2 
Orthologues Aca-Mir-103-P4  Bta-Mir-103-P4  Cfa-Mir-103-P4  Cli-Mir-103-P4  Cmi-Mir-103-P4  Cpi-Mir-103-P4  Cpo-Mir-103-P4  Dno-Mir-103-P4  Ete-Mir-103-P4  Gga-Mir-103-P4  Gja-Mir-103-P4  Hsa-Mir-103-P4  Lch-Mir-103-P4  Loc-Mir-103-P4  Mdo-Mir-103-P4  Mml-Mir-103-P4  Mmu-Mir-103-P4  Mun-Mir-103-P4  Oan-Mir-103-P4  Ocu-Mir-103-P4  Pbv-Mir-103-P4  Pfl-Mir-103  Pmi-Mir-103  Rno-Mir-103-P4  Sha-Mir-103-P4  Sko-Mir-103  Spt-Mir-103-P4  Spu-Mir-103  Sto-Mir-103-P4  Tgu-Mir-103-P4  Xbo-Mir-103  Xla-Mir-103-P4  Xtr-Mir-103-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Deuterostomia
Genome context
(GCF_000281125.3_ASM28112v4_AMI_add)		 NW_017709751.1: 9717031-9717090 [+] UCSC
Precursor
(pre-Mir +30nt flank)
CUGUAACAUCUGUAAUAUCUCAUUGUCUUUGGCUUCUUUACAGUGCUGCCUUGUUGCAUAUGGAUCAAGCAGCAUUGUACAGGGCUAUGAAGACAAUGAGUCUUGCUCUACCGCAAAUAA
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Structure
        10          20        30          40        50         
CUGUAACAUCUGUAAUAU--            --|   U  U           C   UUGCA 
                    CUCAUUGUCUUU  GGCU CU UACAGUGCUGC UUG     U
                    GAGUAACAGAAG  UCGG GA AUGUUACGACG AAC     A
AAUAAACGCCAUCUCGUUCU            UA^   -  C           -   UAGGU 
.       110       100        90         80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Ami-Mir-103-P4_5p* (predicted)
mirBase accessionNone
Sequence 
0- GGCUUCUUUACAGUGCUGCCUUG -23
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Mature sequence

Ami-Mir-103-P4_3p
mirBase accessionMIMAT0038119
Sequence 
37- AGCAGCAUUGUACAGGGCUAUGA -60
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