MirGeneDB ID | Bta-Mir-103-P4 |
Family name |
MIR-103 (all species) |
Species |
Cow (Bos taurus) |
MiRBase ID |
bta-mir-103-1
|
Paralogues |
Bta-Mir-103-P1
Bta-Mir-103-P2
|
Orthologues |
Aca-Mir-103-P4
Ami-Mir-103-P4
Cfa-Mir-103-P4
Cja-Mir-103-P4
Cli-Mir-103-P4
Cmi-Mir-103-P4
Cpi-Mir-103-P4
Cpo-Mir-103-P4
Dno-Mir-103-P4
Eca-Mir-103-P4
Ete-Mir-103-P4
Gga-Mir-103-P4
Gja-Mir-103-P4
Hmi-Mir-103
Hsa-Mir-103-P4
Laf-Mir-103-P4
Lch-Mir-103-P4
Loc-Mir-103-P4
Mdo-Mir-103-P4
Mml-Mir-103-P4
Mmr-Mir-103-P4
Mmu-Mir-103-P4
Mun-Mir-103-P4
Neu-Mir-103-P4
Oan-Mir-103-P4
Ocu-Mir-103-P4
Pab-Mir-103-P4
Pbv-Mir-103-P4
Pfl-Mir-103
Pmi-Mir-103
Rno-Mir-103-P4
Sha-Mir-103-P4
Sko-Mir-103
Spt-Mir-103-P4
Spu-Mir-103
Sro-Mir-103
Sto-Mir-103-P4
Tgu-Mir-103-P4
Xbo-Mir-103
Xla-Mir-103-P4
Xtr-Mir-103-P4
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Bilateria
|
Genome context (GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037347.1: 312543-312602 [-]
UCSC
Ensembl
|
Seed |
GCAGCAU |
Precursor (pre-Mir +30nt flank) |
AUGAGAACUUGGAGGUUCCUUGCUGCCCUCGGCUUCUUUACAGUGCUGCCUUGUUGCAUAUGGAUCAAGCAGCAUUGUACAGGGCUAUGAAGGCGCUGAGGCUGCUCUGCACAUGACAUU
Get precursor sequence
|
Structure | 10 20 30 40 50
AUGAGAACUUGGAGGUU-- - U C --| U U C UUGCA
CCUU GC GCC UC GGCU CU UACAGUGCUGC UUG U
GGAG CG CGG AG UCGG GA AUGUUACGACG AAC A
UUACAGUACACGUCUCGUC U - A UA^ - C - UAGGU
. 110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
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Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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Star sequence |
Bta-Mir-103-P4_5p* |
mirBase accession | None |
Sequence |
0- GGCUUCUUUACAGUGCUGCCUUGU -24
Get sequence
|
Mature sequence |
Bta-Mir-103-P4_3p |
mirBase accession | MIMAT0003521 |
Sequence |
37- AGCAGCAUUGUACAGGGCUAUGA -60
Get sequence
|
Proposed targets |
TargetScanVert: bta-miR-103
|