Mir-103-P2

MirGeneDB ID

Hsa-Mir-103-P2

Family name

MIR-103 (all species)

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-103a-2

Paralogues

Hsa-Mir-103-P1 Hsa-Mir-103-P4

Orthologues

Aca-Mir-103-P2 Ami-Mir-103-P2 Bta-Mir-103-P2 Cfa-Mir-103-P2 Cja-Mir-103-P2 Cli-Mir-103-P2 Cmi-Mir-103-P2 Cpi-Mir-103-P2 Cpo-Mir-103-P2 Dno-Mir-103-P2 Dre-Mir-103-P2a Dre-Mir-103-P2b Eca-Mir-103-P2 Ete-Mir-103-P2 Gga-Mir-103-P2 Gja-Mir-103-P2 Gmo-Mir-103-P2a Gmo-Mir-103-P2b Hmi-Mir-103 Laf-Mir-103-P2 Lch-Mir-103-P2 Loc-Mir-103-P2 Mal-Mir-103-P2a Mal-Mir-103-P2b Mdo-Mir-103-P2 Mml-Mir-103-P2 Mmr-Mir-103-P2 Mmu-Mir-103-P2 Mun-Mir-103-P2 Neu-Mir-103-P2 Oan-Mir-103-P2 Ocu-Mir-103-P2 Pab-Mir-103-P2 Pbv-Mir-103-P2 Pfl-Mir-103 Pma-Mir-103-o2 Pmi-Mir-103 Rno-Mir-103-P2 Sha-Mir-103-P2 Sko-Mir-103 Spt-Mir-103-P2 Spu-Mir-103 Sro-Mir-103 Sto-Mir-103-P2 Tgu-Mir-103-P2 Tni-Mir-103-P2a Tni-Mir-103-P2b Xbo-Mir-103 Xla-Mir-103-P2c Xla-Mir-103-P2d Xtr-Mir-103-P2

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Bilateria

Genome context
(hg38)

chr20: 3917504-3917563 [+] UCSC Ensembl

Seed

GCAGCAU

Precursor
(pre-Mir +30nt flank)

ACCUCAGCAGAGCUGCGUCUUUGUGCUUUCAGCUUCUUUACAGUGCUGCCUUGUAGCAUUCAGGUCAAGCAGCAUUGUACAGGGCUAUGAAAGAACCAAGAAUGGGCUGCCCUUGGGAAA

Get precursor sequence

Structure

        10          20        30          40        50         
ACCUCAGCAGAGCUGCG--    U  G     --|   U  U           C   UAGCA 
                   UCUU GU CUUUC  AGCU CU UACAGUGCUGC UUG     U
                   AGAA CA GAAAG  UCGG GA AUGUUACGACG AAC     U
AAAGGGUUCCCGUCGGGUA    C  A     UA^   -  C           -   UGGAC 
.       110       100        90         80        70         60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Dc	Dc	Dr	Dr	Xp	Xp	Bl	Br	Br	Ce	Ce	Co	Fo	He	Ki	Le	Li	Li	Lu	Pa	Pl	Pl	Sk	Sk	Sk	Sm	Sp	Sp	St	Te	Th	Ut

Star sequence

Hsa-Mir-103-P2_5p*

mirBase accession

MIMAT0009196

Sequence

0- AGCUUCUUUACAGUGCUGCCUUG -23

Get sequence

Proposed targets

microrna.org: MIMAT0009196
TargetScanVert: hsa-miR-103a-2-5p
TargetMiner: hsa-miR-103a-2-5p
miRDB: MIMAT0009196

Mature sequence

Hsa-Mir-103-P2_3p

mirBase accession

MIMAT0000101

Sequence

37- AGCAGCAUUGUACAGGGCUAUGA -60

Get sequence

Proposed targets

microrna.org: MIMAT0000101
TargetScanVert: hsa-miR-103a-3p
TargetMiner: hsa-miR-103a-3p
miRDB: MIMAT0000101