MirGeneDB 3.0
MirGeneDB ID

Cpi-Mir-103-P2

Family name MIR-103 (all species)
Species Western painted turtle (Chrysemys picta bellii)
MiRBase ID cpi-mir-103-2
Paralogues Cpi-Mir-103-P1  Cpi-Mir-103-P4 
Orthologues Aca-Mir-103-P2  Ami-Mir-103-P2  Bta-Mir-103-P2  Cfa-Mir-103-P2  Cja-Mir-103-P2  Cli-Mir-103-P2  Cmi-Mir-103-P2  Cpo-Mir-103-P2  Dno-Mir-103-P2  Dre-Mir-103-P2a  Dre-Mir-103-P2b  Eca-Mir-103-P2  Ete-Mir-103-P2  Gga-Mir-103-P2  Gja-Mir-103-P2  Gmo-Mir-103-P2a  Gmo-Mir-103-P2b  Hmi-Mir-103  Hsa-Mir-103-P2  Laf-Mir-103-P2  Lch-Mir-103-P2  Loc-Mir-103-P2  Mal-Mir-103-P2a  Mal-Mir-103-P2b  Mdo-Mir-103-P2  Mml-Mir-103-P2  Mmr-Mir-103-P2  Mmu-Mir-103-P2  Mun-Mir-103-P2  Neu-Mir-103-P2  Oan-Mir-103-P2  Ocu-Mir-103-P2  Pab-Mir-103-P2  Pbv-Mir-103-P2  Pfl-Mir-103  Pma-Mir-103-o2  Pmi-Mir-103  Rno-Mir-103-P2  Sha-Mir-103-P2  Sko-Mir-103  Spt-Mir-103-P2  Spu-Mir-103  Sro-Mir-103  Sto-Mir-103-P2  Tgu-Mir-103-P2  Tni-Mir-103-P2a  Tni-Mir-103-P2b  Xbo-Mir-103  Xla-Mir-103-P2c  Xla-Mir-103-P2d  Xtr-Mir-103-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(chrPic1)		 JH584586: 8263438-8263497 [+] UCSC Ensembl
Seed GCAGCAU
Precursor
(pre-Mir +30nt flank)		 
UGGGGCUGUCUCUCUGAGCUCUGUGCUUUCAGCUUCUUUACAGUGCUGCCUUGUUGCAUUCAUGUCAAGCAGCAUUGUACAGGGCUAUGAAAGAACUGAGACCCGUUCUUCACUUUAUUU
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Structure
        10          20        30          40        50         
UGGGGCUGUCUCUCUGAG--   U  G     --|   U  U           C   UUGCA 
                    CUC GU CUUUC  AGCU CU UACAGUGCUGC UUG     U
                    GAG CA GAAAG  UCGG GA AUGUUACGACG AAC     U
UUUAUUUCACUUCUUGCCCA   U  A     UA^   -  C           -   UGUAC 
.       110       100        90         80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Te Te Te To
Star sequence

Cpi-Mir-103-P2_5p*
mirBase accessionMIMAT0037720
Sequence 
0- AGCUUCUUUACAGUGCUGCCUUG -23
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Mature sequence

Cpi-Mir-103-P2_3p
mirBase accessionMIMAT0037719
Sequence 
37- AGCAGCAUUGUACAGGGCUAUGA -60
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