MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-103-P2

Family name MIR-103 (all species)
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-103-P1  Sha-Mir-103-P4 
Orthologues Aca-Mir-103-P2  Ami-Mir-103-P2  Bta-Mir-103-P2  Cfa-Mir-103-P2  Cja-Mir-103-P2  Cli-Mir-103-P2  Cmi-Mir-103-P2  Cpi-Mir-103-P2  Cpo-Mir-103-P2  Dno-Mir-103-P2  Dre-Mir-103-P2a  Dre-Mir-103-P2b  Eca-Mir-103-P2  Ete-Mir-103-P2  Gga-Mir-103-P2  Gja-Mir-103-P2  Gmo-Mir-103-P2a  Gmo-Mir-103-P2b  Hmi-Mir-103  Hsa-Mir-103-P2  Laf-Mir-103-P2  Lch-Mir-103-P2  Loc-Mir-103-P2  Mal-Mir-103-P2a  Mal-Mir-103-P2b  Mdo-Mir-103-P2  Mml-Mir-103-P2  Mmr-Mir-103-P2  Mmu-Mir-103-P2  Mun-Mir-103-P2  Neu-Mir-103-P2  Oan-Mir-103-P2  Ocu-Mir-103-P2  Pab-Mir-103-P2  Pbv-Mir-103-P2  Pfl-Mir-103  Pma-Mir-103-o2  Pmi-Mir-103  Rno-Mir-103-P2  Sko-Mir-103  Spt-Mir-103-P2  Spu-Mir-103  Sro-Mir-103  Sto-Mir-103-P2  Tgu-Mir-103-P2  Tni-Mir-103-P2a  Tni-Mir-103-P2b  Xbo-Mir-103  Xla-Mir-103-P2c  Xla-Mir-103-P2d  Xtr-Mir-103-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(DEVIL_add)		 GL834788.1: 1243604-1243663 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-103-P2)		 Mir-103-P2 GL834788.1: 1243604-1243663 [-] UCSC Ensembl
Mir-12316-P2-v1 GL834788.1: 1288785-1288849 [-] UCSC Ensembl
Mir-12316-P2-v2 GL834788.1: 1288785-1288849 [-] UCSC Ensembl
Seed GCAGCAU
Precursor
(pre-Mir +30nt flank)		 
UCUGGAUGGCUUCUCUCUCUUGGUGCUUUCAGCUUCUUUACAGUGCUGCCUUGUUGCAUUGAUGUCAAGCAGCAUUGUACAGGGCUAUGAAAGAACCAAGACGGAUCUUCGCUGCAUUCG
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Structure
        10          20        30          40        50         
UCUGGAUGGCUUCUCUC--       G     --|   U  U           C   UUGCA 
                   UCUUGGU CUUUC  AGCU CU UACAGUGCUGC UUG     U
                   AGAACCA GAAAG  UCGG GA AUGUUACGACG AAC     U
GCUUACGUCGCUUCUAGGC       A     UA^   -  C           -   UGUAG 
.       110       100        90         80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-103-P2_5p*
mirBase accessionNone
Sequence 
0- AGCUUCUUUACAGUGCUGCCUUG -23
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Mature sequence

Sha-Mir-103-P2_3p
mirBase accessionNone
Sequence 
37- AGCAGCAUUGUACAGGGCUAUGA -60
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