MirGeneDB 3.0
MirGeneDB ID

Pma-Mir-103-o2

Family name MIR-103 (all species)
Species Sea Lamprey (Petromyzon marinus)
MiRBase ID pma-mir-103b
Paralogues Pma-Mir-103-o1 
Orthologues Aca-Mir-103-P2  Ami-Mir-103-P2  Bta-Mir-103-P2  Cfa-Mir-103-P2  Cja-Mir-103-P2  Cli-Mir-103-P2  Cmi-Mir-103-P2  Cpi-Mir-103-P2  Cpo-Mir-103-P2  Dno-Mir-103-P2  Dre-Mir-103-P2a  Dre-Mir-103-P2b  Eca-Mir-103-P2  Ete-Mir-103-P2  Gga-Mir-103-P2  Gja-Mir-103-P2  Gmo-Mir-103-P2a  Gmo-Mir-103-P2b  Hmi-Mir-103  Hsa-Mir-103-P2  Laf-Mir-103-P2  Lch-Mir-103-P2  Loc-Mir-103-P2  Mal-Mir-103-P2a  Mal-Mir-103-P2b  Mdo-Mir-103-P2  Mml-Mir-103-P2  Mmr-Mir-103-P2  Mmu-Mir-103-P2  Mun-Mir-103-P2  Neu-Mir-103-P2  Oan-Mir-103-P2  Ocu-Mir-103-P2  Pab-Mir-103-P2  Pbv-Mir-103-P2  Pfl-Mir-103  Pmi-Mir-103  Rno-Mir-103-P2  Sha-Mir-103-P2  Sko-Mir-103  Spt-Mir-103-P2  Spu-Mir-103  Sro-Mir-103  Sto-Mir-103-P2  Tgu-Mir-103-P2  Tni-Mir-103-P2a  Tni-Mir-103-P2b  Xbo-Mir-103  Xla-Mir-103-P2c  Xla-Mir-103-P2d  Xtr-Mir-103-P2 
Node of Origin (locus) P. marinus
Node of Origin (family) Bilateria
Genome context
(GCF_010993605.1_kPetMar1.pri_genomic)		 NC_046097.1: 13332364-13332421 [+] UCSC Ensembl
Seed GCAGCAU
Precursor
(pre-Mir +30nt flank)		 
AGUUAACUGGGCAGUUUACCCUGUUCUCUCGGCCUCUUUACAGUGCUAUCUUGUAGCCUCAAUCAAGCAGCAUUGUACAGGGCUAUGAGAGAGCAAGGACAGCUCUUCAAAUCAUUAA
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Structure
        10          20        30          40        50        
AGUUAACUGGGCAGUUUA--  C         --|   U  U         AU    UAGC 
                    CC UGUUCUCUC  GGCC CU UACAGUGCU  CUUG    C
                    GG ACGAGAGAG  UCGG GA AUGUUACGA  GAAC    U
AAUUACUAAACUUCUCGACA  A         UA^   -  C         C-    UAAC 
      110       100        90         80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Gi Gu He Ki La Li Mo Mu Sk
Star sequence

Pma-Mir-103-o2_5p*
mirBase accessionMIMAT0019442
Sequence 
0- GGCCUCUUUACAGUGCUAUCUUG -23
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Mature sequence

Pma-Mir-103-o2_3p
mirBase accessionMIMAT0019443
Sequence 
35- AGCAGCAUUGUACAGGGCUAUGA -58
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