MirGeneDB 3.0
MirGeneDB ID

Dre-Mir-103-P1a

Family name MIR-103 (all species)
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-107b
Paralogues Dre-Mir-103-P1b  Dre-Mir-103-P2a  Dre-Mir-103-P2b 
Orthologues Aca-Mir-103-P1  Ami-Mir-103-P1  Bta-Mir-103-P1  Cfa-Mir-103-P1  Cja-Mir-103-P1  Cli-Mir-103-P1  Cmi-Mir-103-P1  Cpi-Mir-103-P1  Cpo-Mir-103-P1  Dno-Mir-103-P1  Eca-Mir-103-P1  Ete-Mir-103-P1  Gga-Mir-103-P1  Gja-Mir-103-P1  Hmi-Mir-103  Hsa-Mir-103-P1  Laf-Mir-103-P1  Lch-Mir-103-P1  Loc-Mir-103-P1  Mal-Mir-103-P1a  Mdo-Mir-103-P1  Mml-Mir-103-P1  Mmr-Mir-103-P1  Mmu-Mir-103-P1  Mun-Mir-103-P1  Oan-Mir-103-P1  Ocu-Mir-103-P1  Pab-Mir-103-P1  Pbv-Mir-103-P1  Pfl-Mir-103  Pma-Mir-103-o1  Pmi-Mir-103  Rno-Mir-103-P1  Sha-Mir-103-P1  Sko-Mir-103  Spt-Mir-103-P1  Spu-Mir-103  Sro-Mir-103  Sto-Mir-103-P1  Tgu-Mir-103-P1  Tni-Mir-103-P1a  Xbo-Mir-103  Xtr-Mir-103-P1 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Bilateria
Genome context
(danRer11)		 chr17: 23573143-23573202 [+] UCSC Ensembl
Seed GCAGCAU
Precursor
(pre-Mir +30nt flank)		 
GAGUGAGCAGCAGUCUCUCUGGCCACUCUGGGCUUCUCUACAGUGUUGCCUUGUAGCCUGGUGAUCAAGCAGCAUUGUACAGGGCUUUCAGCGUGUACAGAACACCAUCAGAGCGGAAAC
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Structure
        10          20        30          40        50         
GAGUGAGCAGCAGUCUC--    GC   U   --|   U  C           C   UAGCC 
                   UCUG  CAC CUG  GGCU CU UACAGUGUUGC UUG     U
                   AGAC  GUG GAC  UCGG GA AUGUUACGACG AAC     G
CAAAGGCGAGACUACCACA    AU   C   UU^   -  C           -   UAGUG 
.       110       100        90         80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Br Em Ey Gu Gu He Li Li Ov Te
Star sequence

Dre-Mir-103-P1a_5p*
mirBase accessionNone
Sequence 
0- GGCUUCUCUACAGUGUUGCCUUG -23
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Mature sequence

Dre-Mir-103-P1a_3p
mirBase accessionMIMAT0011301
Sequence 
37- AGCAGCAUUGUACAGGGCUUUCA -60
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Proposed targets TargetScanFish: dre-miR-107b