MirGeneDB 3.0

MirGeneDB ID

Bla-Mir-103-P8

Family name MIR-103 (all species)
Species European lancelet (Branchiostoma lanceolatum)
MiRBase ID
Paralogues Bla-Mir-103-P5  Bla-Mir-103-P6  Bla-Mir-103-P7 
Orthologues Bfl-Mir-103-P8  Hmi-Mir-103  Pfl-Mir-103  Pmi-Mir-103  Sko-Mir-103  Spu-Mir-103  Sro-Mir-103  Xbo-Mir-103 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Bilateria
Genome context
(BraLan2)
Sc0000082: 843372-843431 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-103-P8)
Mir-103-P8 Sc0000082: 843372-843431 [-] Ensembl
Mir-103-P7 Sc0000082: 845654-845713 [-] Ensembl
Seed AGCAGCA
Precursor
(pre-Mir +30nt flank)
AAGGAAGCCUGAUCCCUCAUCCAUGUUUCAACUGUUGCAUCUUGCUGCCUUUAGAACCUUCCAUCCAUAAAGCAGCAGUAUGCAAUGGUGAAAAAUGGAUGCCAUGAUUCAGCUGUAGAU
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Structure
        10          20        30        40        50          
AAGGAAGCCUGAUCCCU--|      G     A         C       CUUUAGAACCU 
                   CAUCCAU UUUCA CUGUUGCAU UUGCUGC           \
                   GUAGGUA AAAGU GGUAACGUA GACGACG           U
UAGAUGUCGACUUAGUACC^      A     -         U       AAAUACCUACC 
.       110       100        90         80        70
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
- +
Ad Ad Em Em Em Em
Star sequence

Bla-Mir-103-P8_5p*

mirBase accessionNone
Sequence
0- ACUGUUGCAUCUUGCUGCCUUU -22
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Mature sequence

Bla-Mir-103-P8_3p

mirBase accessionNone
Sequence
39- AAGCAGCAGUAUGCAAUGGUG -60
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