Mir
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2.1
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79 microRNA genes with seed GGCUCAG
Sort by genome coordinates
Motifs
MirGeneDB ID
MiRBase ID
Family
Seed
5p accession
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
▼
Node of origin (family)
3' NTU
UG
UGUG
CNNC
Xla-Mir-24-P2d
xla-mir-24a-1
MIR-24
GGCUCAG
MIMAT0046550
MIMAT0046551
NC_030725.1
110864858
110864916
+
X. laevis
Vertebrata
Yes
Xla-Mir-24-P3d
None
MIR-24
GGCUCAG
None
None
NW_016694811.1
2508830
2508890
+
X. laevis
Vertebrata
Yes
1
1
1
Xla-Mir-24-P2c
xla-mir-24a-2
MIR-24
GGCUCAG
MIMAT0046550
MIMAT0046551
NC_030724.1
133829567
133829625
+
X. laevis
Vertebrata
Yes
Xla-Mir-24-P3c
xla-mir-24b-1
MIR-24
GGCUCAG
None
MIMAT0011146
NC_030728.1
133946953
133947013
+
X. laevis
Vertebrata
Yes
1
1
Mun-Mir-24-P3a
None
MIR-24
GGCUCAG
None
None
24-P3_LR594634.1:194255352-194255493
42
101
-
M. unicolor
Vertebrata
Yes
Mun-Mir-24-P3b
None
MIR-24
GGCUCAG
None
None
24-P3_LR594634.1:194188862-194189003
42
101
-
M. unicolor
Vertebrata
Yes
Dre-Mir-24-P2a
dre-mir-24-1
MIR-24
GGCUCAG
None
MIMAT0001792
chr10
15960847
15960904
+
Clupeocephala
Vertebrata
Yes
1
Tni-Mir-24-P4a
None
MIR-24
GGCUCAG
None
None
1
16060478
16060537
+
Clupeocephala
Vertebrata
Yes
1
1
Gmo-Mir-24-P4a
gmo-mir-24a-1
MIR-24
GGCUCAG
None
MIMAT0044048
GeneScaffold_1112
349423
349481
-
Clupeocephala
Vertebrata
Yes
Dre-Mir-24-P4a
dre-mir-24-4
MIR-24
GGCUCAG
None
MIMAT0001792
chr22
5307502
5307561
+
Clupeocephala
Vertebrata
Yes
1
Tni-Mir-24-P2b
tni-mir-24-1
MIR-24
GGCUCAG
None
MIMAT0003066
12
8518120
8518178
+
Clupeocephala
Vertebrata
Yes
Gmo-Mir-24-P2b
gmo-mir-24a-3
MIR-24
GGCUCAG
MIMAT0044116
MIMAT0044048
GeneScaffold_1288
2079157
2079215
-
Clupeocephala
Vertebrata
Yes
1
Dre-Mir-24-P2b
dre-mir-24-3
MIR-24
GGCUCAG
None
MIMAT0001792
chr8
30162533
30162590
-
Clupeocephala
Vertebrata
Yes
1
Tni-Mir-24-P4b
None
MIR-24
GGCUCAG
None
None
15_random
2810523
2810582
+
Clupeocephala
Vertebrata
No
1
Sto-Mir-24-P1
None
MIR-24
GGCUCAG
None
None
BFAA01002570.1
216501
216561
-
Gnathostomata
Vertebrata
Yes
1
Lch-Mir-24-P1
None
MIR-24
GGCUCAG
None
None
JH126762.1
1801884
1801943
-
Gnathostomata
Vertebrata
Unknown
Tni-Mir-24-P1
None
MIR-24
GGCUCAG
None
None
15_random
3093022
3093080
-
Gnathostomata
Vertebrata
Yes
Gmo-Mir-24-P1
gmo-mir-24a-4
MIR-24
GGCUCAG
MIMAT0044047
MIMAT0044048
contig393630
353
416
+
Gnathostomata
Vertebrata
No
Dre-Mir-24-P1
dre-mir-24b
MIR-24
GGCUCAG
MIMAT0048662
MIMAT0048663
chr2
33905775
33905834
+
Gnathostomata
Vertebrata
Yes
Loc-Mir-24-P1
None
MIR-24
GGCUCAG
None
None
LG10
2473205
2473264
-
Gnathostomata
Vertebrata
No
Tgu-Mir-24-P2
tgu-mir-24
MIR-24
GGCUCAG
MIMAT0026994
MIMAT0014539
Z
10608541
10608600
-
Gnathostomata
Vertebrata
Yes
Sto-Mir-24-P2
None
MIR-24
GGCUCAG
None
None
BFAA01002700.1
238946
239005
-
Gnathostomata
Vertebrata
Yes
1
Hsa-Mir-24-P2
hsa-mir-24-1
MIR-24
GGCUCAG
MIMAT0000079
MIMAT0000080
chr9
95086026
95086085
+
Gnathostomata
Vertebrata
Yes
Ami-Mir-24-P2
ami-mir-24-1
MIR-24
GGCUCAG
MIMAT0038061
MIMAT0038062
NW_017713772.1
16892177
16892236
-
Gnathostomata
Vertebrata
Yes
Cmi-Mir-24-P2
None
MIR-24
GGCUCAG
None
None
KI635929.1
200598
200657
+
Gnathostomata
Vertebrata
Yes
Mml-Mir-24-P2
mml-mir-24-1
MIR-24
GGCUCAG
MIMAT0002336
MIMAT0002337
chr15
108904881
108904940
+
Gnathostomata
Vertebrata
Yes
Cpi-Mir-24-P2
cpi-mir-24-1
MIR-24
GGCUCAG
MIMAT0037657
MIMAT0037658
JH584764
1108440
1108499
-
Gnathostomata
Vertebrata
Yes
Mmu-Mir-24-P2
mmu-mir-24-1
MIR-24
GGCUCAG
MIMAT0000218
MIMAT0000219
chr13
63301213
63301272
+
Gnathostomata
Vertebrata
Yes
Aca-Mir-24-P2
aca-mir-24-2
MIR-24
GGCUCAG
MIMAT0021901
MIMAT0021900
2
40591325
40591384
-
Gnathostomata
Vertebrata
Yes
Rno-Mir-24-P2
rno-mir-24-1
MIR-24
GGCUCAG
MIMAT0003153
MIMAT0000794
chr17
823973
824032
+
Gnathostomata
Vertebrata
Yes
Pbv-Mir-24-P2
pbv-mir-24-1
MIR-24
GGCUCAG
MIMAT0038856
MIMAT0038857
KE954626.1
205436
205495
+
Gnathostomata
Vertebrata
Yes
Cpo-Mir-24-P2
cpo-mir-24-1
MIR-24
GGCUCAG
MIMAT0046880
MIMAT0046881
scaffold_42
4055099
4055157
-
Gnathostomata
Vertebrata
Yes
Ocu-Mir-24-P2
ocu-mir-24-1
MIR-24
GGCUCAG
MIMAT0048130
MIMAT0048131
chr1
74102787
74102846
+
Gnathostomata
Vertebrata
Yes
Spt-Mir-24-P2
None
MIR-24
GGCUCAG
None
None
QEPC01008874.1
6803606
6803665
+
Gnathostomata
Vertebrata
Unknown
Cfa-Mir-24-P2
cfa-mir-24-1
MIR-24
GGCUCAG
None
MIMAT0006614
chr1
71677609
71677668
-
Gnathostomata
Vertebrata
Yes
Bta-Mir-24-P2
bta-mir-24-1
MIR-24
GGCUCAG
MIMAT0009250
None
NC_037335.1
81617799
81617858
+
Gnathostomata
Vertebrata
Yes
Xtr-Mir-24-P2
xtr-mir-24a
MIR-24
GGCUCAG
MIMAT0003653
MIMAT0003654
chr1
123464320
123464378
+
Gnathostomata
Vertebrata
Yes
Dno-Mir-24-P2
dno-mir-24a
MIR-24
GGCUCAG
MIMAT0047532
MIMAT0047533
JH570415
2090841
2090900
+
Gnathostomata
Vertebrata
Yes
Mun-Mir-24-P2
None
MIR-24
GGCUCAG
None
None
24-P2_LR594633.1:206442340-206442481
42
101
-
Gnathostomata
Vertebrata
Yes
Ete-Mir-24-P2
None
MIR-24
GGCUCAG
None
None
JH980384
3444858
3444917
-
Gnathostomata
Vertebrata
Yes
Lch-Mir-24-P2
None
MIR-24
GGCUCAG
None
None
JH126823.1
175961
176020
-
Gnathostomata
Vertebrata
Unknown
Sha-Mir-24-P2
sha-mir-24-1
MIR-24
GGCUCAG
None
MIMAT0022787
GL841474.1
1160665
1160724
+
Gnathostomata
Vertebrata
Yes
Mdo-Mir-24-P2
mdo-mir-24-1
MIR-24
GGCUCAG
None
MIMAT0004175
6
17696509
17696568
+
Gnathostomata
Vertebrata
Yes
Oan-Mir-24-P2
oan-mir-24-1
MIR-24
GGCUCAG
MIMAT0006954
MIMAT0006955
NC_041753.1
69581866
69581924
+
Gnathostomata
Vertebrata
Yes
1
Gga-Mir-24-P2
gga-mir-24
MIR-24
GGCUCAG
MIMAT0026548
MIMAT0001188
Z
41661400
41661459
+
Gnathostomata
Vertebrata
Yes
Loc-Mir-24-P2
None
MIR-24
GGCUCAG
None
None
LG2
32737407
32737466
-
Gnathostomata
Vertebrata
Yes
Tgu-Mir-24-P3
None
MIR-24
GGCUCAG
None
None
30
3317000
3317059
+
Gnathostomata
Vertebrata
Yes
1
Sto-Mir-24-P3
None
MIR-24
GGCUCAG
None
None
BFAA01001728.1
147134
147193
-
Gnathostomata
Vertebrata
Yes
1
Hsa-Mir-24-P3
hsa-mir-24-2
MIR-24
GGCUCAG
MIMAT0004497
MIMAT0000080
chr19
13836289
13836348
-
Gnathostomata
Vertebrata
Yes
Ami-Mir-24-P3
ami-mir-24-2
MIR-24
GGCUCAG
MIMAT0038063
MIMAT0038062
NW_017713323.1
200859
200919
+
Gnathostomata
Vertebrata
Yes
1
Cmi-Mir-24-P3
None
MIR-24
GGCUCAG
None
None
KI635928.1
356764
356823
+
Gnathostomata
Vertebrata
Yes
1
Mml-Mir-24-P3
mml-mir-24-2
MIR-24
GGCUCAG
None
MIMAT0002337
chr19
13838862
13838921
-
Gnathostomata
Vertebrata
Yes
Cpi-Mir-24-P3
cpi-mir-24-2
MIR-24
GGCUCAG
MIMAT0037659
MIMAT0037658
JH584948
868114
868173
-
Gnathostomata
Vertebrata
No
Mmu-Mir-24-P3
mmu-mir-24-2
MIR-24
GGCUCAG
MIMAT0005440
MIMAT0000219
chr8
84208839
84208896
+
Gnathostomata
Vertebrata
Yes
Aca-Mir-24-P3
aca-mir-24-1
MIR-24
GGCUCAG
MIMAT0021899
MIMAT0021900
2
29157652
29157711
-
Gnathostomata
Vertebrata
Yes
Rno-Mir-24-P3
rno-mir-24-2
MIR-24
GGCUCAG
MIMAT0005441
MIMAT0000794
chr19
25318887
25318944
+
Gnathostomata
Vertebrata
Yes
Pbv-Mir-24-P3
pbv-mir-24-2
MIR-24
GGCUCAG
None
MIMAT0038857
KE953590.1
99568
99627
-
Gnathostomata
Vertebrata
Yes
1
Cpo-Mir-24-P3
cpo-mir-24-2
MIR-24
GGCUCAG
MIMAT0046882
MIMAT0046881
scaffold_42
12931984
12932043
+
Gnathostomata
Vertebrata
Yes
Gja-Mir-24-P3
None
MIR-24
GGCUCAG
None
None
NW_015175453.1
135655
135714
-
Gnathostomata
Vertebrata
Yes
1
Ocu-Mir-24-P3
ocu-mir-24-2
MIR-24
GGCUCAG
MIMAT0048132
MIMAT0048131
chrUn0990
23718
23778
+
Gnathostomata
Vertebrata
Yes
Cfa-Mir-24-P3
cfa-mir-24-2
MIR-24
GGCUCAG
None
MIMAT0006614
chr20
48620685
48620744
+
Gnathostomata
Vertebrata
Yes
Bta-Mir-24-P3
bta-mir-24-2
MIR-24
GGCUCAG
None
MIMAT0003840
NC_037334.1
11839043
11839102
+
Gnathostomata
Vertebrata
Yes
Xtr-Mir-24-P3
xtr-mir-24b
MIR-24
GGCUCAG
None
MIMAT0003655
chr3
129999419
129999478
+
Gnathostomata
Vertebrata
Yes
1
1
Dno-Mir-24-P3
dno-mir-24b
MIR-24
GGCUCAG
MIMAT0047534
MIMAT0047535
AAGV03195862
467
526
+
Gnathostomata
Vertebrata
Yes
Ete-Mir-24-P3
None
MIR-24
GGCUCAG
None
None
JH980397
3706485
3706544
+
Gnathostomata
Vertebrata
Yes
1
Lch-Mir-24-P3
None
MIR-24
GGCUCAG
None
None
JH126758.1
373059
373117
-
Gnathostomata
Vertebrata
Unknown
Sha-Mir-24-P3
sha-mir-24-2
MIR-24
GGCUCAG
None
MIMAT0022787
GL841415.1
821300
821359
+
Gnathostomata
Vertebrata
Yes
Tni-Mir-24-P3
tni-mir-24-2
MIR-24
GGCUCAG
None
MIMAT0003066
3
8971072
8971130
+
Gnathostomata
Vertebrata
Yes
1
1
Mdo-Mir-24-P3
mdo-mir-24-2
MIR-24
GGCUCAG
MIMAT0026712
MIMAT0004175
3
446526151
446526210
+
Gnathostomata
Vertebrata
Yes
Gmo-Mir-24-P3
gmo-mir-24a-2
MIR-24
GGCUCAG
MIMAT0044292
MIMAT0044048
GeneScaffold_4493
201873
201931
-
Gnathostomata
Vertebrata
Yes
1
1
Oan-Mir-24-P3
oan-mir-24-2
MIR-24
GGCUCAG
MIMAT0031092
MIMAT0006955
Oan-Mir-24_27-P1_KAAE-cwe25b12
394
453
+
Gnathostomata
Vertebrata
Yes
Gga-Mir-24-P3
None
MIR-24
GGCUCAG
None
None
30
1398627
1398686
+
Gnathostomata
Vertebrata
Yes
1
Dre-Mir-24-P3
dre-mir-24-2
MIR-24
GGCUCAG
None
MIMAT0001792
chr3
13412992
13413050
+
Gnathostomata
Vertebrata
Yes
1
Loc-Mir-24-P3
None
MIR-24
GGCUCAG
None
None
LG6
12902019
12902078
-
Gnathostomata
Vertebrata
Yes
1
Sto-Mir-24-P4
None
MIR-24
GGCUCAG
None
None
BFAA01000014.1
1439309
1439368
+
Gnathostomata
Vertebrata
No
Lch-Mir-24-P4
None
MIR-24
GGCUCAG
None
None
JH127091.1
1152354
1152413
-
Gnathostomata
Vertebrata
Unknown
1
Loc-Mir-24-P4
None
MIR-24
GGCUCAG
None
None
LG19
5781223
5781282
+
Gnathostomata
Vertebrata
Yes
1
Ebu-Mir-24-P5
None
MIR-24
GGCUCAG
None
None
FYBX02009499.1
1845596
1845653
-
E. burgeri
Vertebrata
Yes
1
Pma-Mir-24-o1
pma-mir-24
MIR-24
GGCUCAG
None
MIMAT0019405
NC_046103.1
7153250
7153310
-
P. marinus
Vertebrata
Yes
1
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