MirGeneDB 3.0
MirGeneDB ID

Cte-Mir-10-P1

Family name MIR-10 (all species)
Species Polychaete worm (Capitella teleta)
MiRBase ID cte-mir-10a
Paralogues Cte-Mir-10-P2  Cte-Mir-10-P3  Cte-Mir-10-P4  Cte-Mir-10-P5  Cte-Mir-10-P6  Cte-Mir-10-P7  Cte-Mir-10-P7-as  Cte-Mir-10-P8 
Orthologues Aae-Mir-10-P1-v1  Aca-Mir-10-P1b-v1  Aca-Mir-10-P1c-v1  Aca-Mir-10-P1d-v1  Adi-Mir-10  Aga-Mir-10-P1-v1  Agr-Mir-10-P1  Ami-Mir-10-P1b-v1  Ami-Mir-10-P1c-v1  Ami-Mir-10-P1d-v1  Asp-Mir-10  Asu-Mir-10-P1  Bfl-Mir-10-P1-v1  Bge-Mir-10-P1-v1  Bla-Mir-10-P1-v1  Bta-Mir-10-P1b-v1  Bta-Mir-10-P1c-v1  Cbr-Mir-10-P1  Cel-Mir-10-P1  Cfa-Mir-10-P1b-v1  Cfa-Mir-10-P1c-v1  Cja-Mir-10-P1b-v1  Cja-Mir-10-P1c-v1  Cli-Mir-10-P1b-v1  Cli-Mir-10-P1c-v1  Cli-Mir-10-P1d-v1  Cmi-Mir-10-P1b-v1  Cmi-Mir-10-P1c-v1  Cmi-Mir-10-P1d-v1  Cpi-Mir-10-P1b-v1  Cpi-Mir-10-P1c-v1  Cpi-Mir-10-P1d-v1  Cpo-Mir-10-P1b-v1  Cpo-Mir-10-P1c-v1  Csc-Mir-10-P1q1-v1  Csc-Mir-10-P1q2-v1  Csc-Mir-10-P1q3-v1  Csc-Mir-10-P1r  Dan-Mir-10-P1  Dgr-Mir-10-P1  Dlo-Mir-10-P1-v1  Dma-Mir-10-P1-v1  Dme-Mir-10-P1  Dmo-Mir-10-P1  Dno-Mir-10-P1b-v1  Dno-Mir-10-P1c-v1  Dpu-Mir-10-P1-v1  Dre-Mir-10-P1b1-v1  Dre-Mir-10-P1b2-v1  Dre-Mir-10-P1c1-v1  Dre-Mir-10-P1c2-v1  Dre-Mir-10-P1d1-v1  Dsi-Mir-10-P1  Dya-Mir-10-P1  Eba-Mir-10-P1  Ebu-Mir-10-P1e  Ebu-Mir-10-P1f  Eca-Mir-10-P1b-v1  Eca-Mir-10-P1c-v1  Efe-Mir-10-P1  Egr-Mir-10-P1  Ete-Mir-10-P1b-v1  Ete-Mir-10-P1c-v1  Gga-Mir-10-P1b-v1  Gga-Mir-10-P1c-v1  Gga-Mir-10-P1d-v1  Gja-Mir-10-P1b-v1  Gja-Mir-10-P1c-v1  Gja-Mir-10-P1d-v1  Gmo-Mir-10-P1b1-v1  Gmo-Mir-10-P1b2-v1  Gmo-Mir-10-P1c1-v1  Gmo-Mir-10-P1c2-v1  Gmo-Mir-10-P1d1-v1  Gpa-Mir-10-P1  Gsa-Mir-10-P1o6  Gsa-Mir-10-P1o7  Gsp-Mir-10-P1  Hme-Mir-10-P1-v1  Hmi-Mir-10-P1a  Hmi-Mir-10-P1b  Hru-Mir-10-P1  Hsa-Mir-10-P1b-v1  Hsa-Mir-10-P1c-v1  Isc-Mir-10-P1-v1  Laf-Mir-10-P1b  Laf-Mir-10-P1c-v1  Lan-Mir-10-P1u  Lan-Mir-10-P1v  Lch-Mir-10-P1b  Lch-Mir-10-P1c  Lch-Mir-10-P1d  Lgi-Mir-10-P1  Lhy-Mir-10-P1  Llo-Mir-10-P1  Loc-Mir-10-P1b-v1  Loc-Mir-10-P1c-v1  Loc-Mir-10-P1d-v1  Lpo-Mir-10-P1k-v1  Lpo-Mir-10-P1l-v1  Lpo-Mir-10-P1m-v1  Lpo-Mir-10-P1n-v1  Lpo-Mir-10-P1o-v1  Lpo-Mir-10-P1p-v1  Mal-Mir-10-P1b1-v1  Mal-Mir-10-P1b2  Mal-Mir-10-P1c1-v1  Mal-Mir-10-P1c2a-v1  Mal-Mir-10-P1c2b-v1  Mal-Mir-10-P1d1-v1  Mdo-Mir-10-P1b-v1  Mdo-Mir-10-P1c-v1  Mgi-Mir-10-P1  Mml-Mir-10-P1b-v1  Mml-Mir-10-P1c-v1  Mmr-Mir-10-P1b-v1  Mmr-Mir-10-P1c-v1  Mmu-Mir-10-P1b-v1  Mmu-Mir-10-P1c-v1  Mom-Mir-10-P1  Mun-Mir-10-P1b-v1  Mun-Mir-10-P1c-v1  Mun-Mir-10-P1d-v1  Neu-Mir-10-P1b-v1  Neu-Mir-10-P1c-v1  Npo-Mir-10-P1  Nve-Mir-10  Oan-Mir-10-P1b-v1  Oan-Mir-10-P1c-v1  Ocu-Mir-10-P1b-v1  Ocu-Mir-10-P1c-v1  Ofu-Mir-10-P1  Pab-Mir-10-P1b-v1  Pab-Mir-10-P1c-v1  Pau-Mir-10-P1  Pbv-Mir-10-P1b-v1  Pbv-Mir-10-P1c-v1  Pbv-Mir-10-P1d-v1  Pca-Mir-10-P1  Pcr-Mir-10-P1o4-v1  Pcr-Mir-10-P1o5  Pdu-Mir-10-P1  Pfl-Mir-10-P1  Pma-Mir-10-P1o1  Pma-Mir-10-P1o2  Pmi-Mir-10-P1  Pve-Mir-10-P1  Rno-Mir-10-P1b-v1  Rno-Mir-10-P1c-v1  Rph-Mir-10-P1  Sha-Mir-10-P1b-v1  Sha-Mir-10-P1c-v1  Sko-Mir-10-P1  Sma-Mir-10-P1  Sme-Mir-10-P1s  Sme-Mir-10-P1t  Snu-Mir-10-P1  Spt-Mir-10-P1b  Spt-Mir-10-P1c  Spu-Mir-10-P1  Sro-Mir-10-P1w  Sro-Mir-10-P1x  Sto-Mir-10-P1b-v1  Sto-Mir-10-P1c-v1  Tca-Mir-10-P1-v1  Tgu-Mir-10-P1b-v1  Tgu-Mir-10-P1c-v1  Tni-Mir-10-P1b1-v1  Tni-Mir-10-P1b2  Tni-Mir-10-P1c1-v1  Tni-Mir-10-P1c2-v1  Tni-Mir-10-P1d1-v1  Tur-Mir-10-P1y  Tur-Mir-10-P1z-v1  War-Mir-10-P1  Xbo-Mir-10-P1  Xla-Mir-10-P1b3-v1  Xla-Mir-10-P1b4-v1  Xla-Mir-10-P1c3-v1  Xla-Mir-10-P1c4-v1  Xla-Mir-10-P1d3-v1  Xla-Mir-10-P1d4-v1  Xtr-Mir-10-P1b-v1  Xtr-Mir-10-P1c-v1  Xtr-Mir-10-P1d-v1 
Node of Origin (locus) Annelida
Node of Origin (family) Eumetazoa
Genome context
(Capitella_teleta_v1.0)		 CAPTEscaffold_70: 265131-265196 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-10-P1)		 Mir-10-P4 CAPTEscaffold_70: 218590-218651 [+] Ensembl
Mir-10-P8 CAPTEscaffold_70: 255158-255218 [+] Ensembl
Mir-10-P1 CAPTEscaffold_70: 265131-265196 [-] Ensembl
Seed ACCCUGU
Precursor
(pre-Mir +30nt flank)		 
UCCAUUUCGUCUUCAGUGCUCCUCAAUGUUUACCCUGUAGUUCCGGAUUUGUCUUGAAUCUCAGCAAAGCAAACAAAUUCGAUUCCUCGGGGUUUCAUGUUGAGUGAGACUUAUCUUCUAGGUAUG
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Structure
        10        20         30         40         50        60  
UCCAUUUCGUCUUCAGUG   -        UU-|     U  UUC-         CUUGAAUCU 
                  CUC CUCAAUGU   ACCCUG AG    CGGAUUUGU         C
                  GAG GAGUUGUA   UGGGGC UC    GCUUAAACA         A
GUAUGGAUCUUCUAUUCA   U        CUU^     -  CUUA         AACGAAACG 
    120       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Ea Fe Fe La La Ma Ma To
Mature sequence

Cte-Mir-10-P1_5p
mirBase accessionMIMAT0009509
Sequence 
0- UACCCUGUAGUUCCGGAUUUGU -22
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Star sequence

Cte-Mir-10-P1_3p*
mirBase accessionNone
Sequence 
44- AAAUUCGAUUCCUCGGGGUUUC -66
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