MirGeneDB ID | Aae-Mir-10-P1 |
Family name |
MIR-10 (all species) |
Species |
Yellow fever mosquito (Aedes aegypti) |
MiRBase ID |
aae-mir-10
|
Paralogues |
Aae-Mir-10-P2
Aae-Mir-10-P3
Aae-Mir-10-P4
|
Orthologues |
Aca-Mir-10-P1b-v1
Aca-Mir-10-P1c-v1
Aca-Mir-10-P1d-v1
Adi-Mir-10
Aga-Mir-10-P1-v1
Agr-Mir-10-P1
Ami-Mir-10-P1b-v1
Ami-Mir-10-P1c-v1
Ami-Mir-10-P1d-v1
Asp-Mir-10
Asu-Mir-10-P1
Bfl-Mir-10-P1-v1
Bge-Mir-10-P1-v1
Bla-Mir-10-P1-v1
Bta-Mir-10-P1b-v1
Bta-Mir-10-P1c-v1
Cbr-Mir-10-P1
Cel-Mir-10-P1
Cfa-Mir-10-P1b-v1
Cfa-Mir-10-P1c-v1
Cja-Mir-10-P1b-v1
Cja-Mir-10-P1c-v1
Cli-Mir-10-P1b-v1
Cli-Mir-10-P1c-v1
Cli-Mir-10-P1d-v1
Cmi-Mir-10-P1b-v1
Cmi-Mir-10-P1c-v1
Cmi-Mir-10-P1d-v1
Cpi-Mir-10-P1b-v1
Cpi-Mir-10-P1c-v1
Cpi-Mir-10-P1d-v1
Cpo-Mir-10-P1b-v1
Cpo-Mir-10-P1c-v1
Csc-Mir-10-P1q1-v1
Csc-Mir-10-P1q2-v1
Csc-Mir-10-P1q3-v1
Csc-Mir-10-P1r
Cte-Mir-10-P1
Dan-Mir-10-P1
Dgr-Mir-10-P1
Dlo-Mir-10-P1-v1
Dma-Mir-10-P1-v1
Dme-Mir-10-P1
Dmo-Mir-10-P1
Dno-Mir-10-P1b-v1
Dno-Mir-10-P1c-v1
Dpu-Mir-10-P1-v1
Dre-Mir-10-P1b1-v1
Dre-Mir-10-P1b2-v1
Dre-Mir-10-P1c1-v1
Dre-Mir-10-P1c2-v1
Dre-Mir-10-P1d1-v1
Dsi-Mir-10-P1
Dya-Mir-10-P1
Eba-Mir-10-P1
Ebu-Mir-10-P1e
Ebu-Mir-10-P1f
Eca-Mir-10-P1b-v1
Eca-Mir-10-P1c-v1
Efe-Mir-10-P1
Egr-Mir-10-P1
Ete-Mir-10-P1b-v1
Ete-Mir-10-P1c-v1
Gga-Mir-10-P1b-v1
Gga-Mir-10-P1c-v1
Gga-Mir-10-P1d-v1
Gja-Mir-10-P1b-v1
Gja-Mir-10-P1c-v1
Gja-Mir-10-P1d-v1
Gmo-Mir-10-P1b1-v1
Gmo-Mir-10-P1b2-v1
Gmo-Mir-10-P1c1-v1
Gmo-Mir-10-P1c2-v1
Gmo-Mir-10-P1d1-v1
Gpa-Mir-10-P1
Gsa-Mir-10-P1o6
Gsa-Mir-10-P1o7
Gsp-Mir-10-P1
Hme-Mir-10-P1-v1
Hmi-Mir-10-P1a
Hmi-Mir-10-P1b
Hru-Mir-10-P1
Hsa-Mir-10-P1b-v1
Hsa-Mir-10-P1c-v1
Isc-Mir-10-P1-v1
Laf-Mir-10-P1b
Laf-Mir-10-P1c-v1
Lan-Mir-10-P1u
Lan-Mir-10-P1v
Lch-Mir-10-P1b
Lch-Mir-10-P1c
Lch-Mir-10-P1d
Lgi-Mir-10-P1
Lhy-Mir-10-P1
Llo-Mir-10-P1
Loc-Mir-10-P1b-v1
Loc-Mir-10-P1c-v1
Loc-Mir-10-P1d-v1
Lpo-Mir-10-P1k-v1
Lpo-Mir-10-P1l-v1
Lpo-Mir-10-P1m-v1
Lpo-Mir-10-P1n-v1
Lpo-Mir-10-P1o-v1
Lpo-Mir-10-P1p-v1
Mal-Mir-10-P1b1-v1
Mal-Mir-10-P1b2
Mal-Mir-10-P1c1-v1
Mal-Mir-10-P1c2a-v1
Mal-Mir-10-P1c2b-v1
Mal-Mir-10-P1d1-v1
Mdo-Mir-10-P1b-v1
Mdo-Mir-10-P1c-v1
Mgi-Mir-10-P1
Mml-Mir-10-P1b-v1
Mml-Mir-10-P1c-v1
Mmr-Mir-10-P1b-v1
Mmr-Mir-10-P1c-v1
Mmu-Mir-10-P1b-v1
Mmu-Mir-10-P1c-v1
Mom-Mir-10-P1
Mun-Mir-10-P1b-v1
Mun-Mir-10-P1c-v1
Mun-Mir-10-P1d-v1
Neu-Mir-10-P1b-v1
Neu-Mir-10-P1c-v1
Npo-Mir-10-P1
Nve-Mir-10
Oan-Mir-10-P1b-v1
Oan-Mir-10-P1c-v1
Ocu-Mir-10-P1b-v1
Ocu-Mir-10-P1c-v1
Ofu-Mir-10-P1
Pab-Mir-10-P1b-v1
Pab-Mir-10-P1c-v1
Pau-Mir-10-P1
Pbv-Mir-10-P1b-v1
Pbv-Mir-10-P1c-v1
Pbv-Mir-10-P1d-v1
Pca-Mir-10-P1
Pcr-Mir-10-P1o4-v1
Pcr-Mir-10-P1o5
Pdu-Mir-10-P1
Pfl-Mir-10-P1
Pma-Mir-10-P1o1
Pma-Mir-10-P1o2
Pmi-Mir-10-P1
Pve-Mir-10-P1
Rno-Mir-10-P1b-v1
Rno-Mir-10-P1c-v1
Rph-Mir-10-P1
Sha-Mir-10-P1b-v1
Sha-Mir-10-P1c-v1
Sko-Mir-10-P1
Sma-Mir-10-P1
Sme-Mir-10-P1s
Sme-Mir-10-P1t
Snu-Mir-10-P1
Spt-Mir-10-P1b
Spt-Mir-10-P1c
Spu-Mir-10-P1
Sro-Mir-10-P1w
Sro-Mir-10-P1x
Sto-Mir-10-P1b-v1
Sto-Mir-10-P1c-v1
Tca-Mir-10-P1-v1
Tgu-Mir-10-P1b-v1
Tgu-Mir-10-P1c-v1
Tni-Mir-10-P1b1-v1
Tni-Mir-10-P1b2
Tni-Mir-10-P1c1-v1
Tni-Mir-10-P1c2-v1
Tni-Mir-10-P1d1-v1
Tur-Mir-10-P1y
Tur-Mir-10-P1z-v1
War-Mir-10-P1
Xbo-Mir-10-P1
Xla-Mir-10-P1b3-v1
Xla-Mir-10-P1b4-v1
Xla-Mir-10-P1c3-v1
Xla-Mir-10-P1c4-v1
Xla-Mir-10-P1d3-v1
Xla-Mir-10-P1d4-v1
Xtr-Mir-10-P1b-v1
Xtr-Mir-10-P1c-v1
Xtr-Mir-10-P1d-v1
|
Node of Origin (locus) |
Bilateria
|
Node of Origin (family) |
Eumetazoa
|
Genome context (Aaeg_L3) |
supercont1.440: 813557-813619 [+]
Ensembl
|
Clustered miRNAs (< 50kb from Mir-10-P1-v1) |
Mir-10-P1-v2
supercont1.440: 813556-813620 [+]
Ensembl
Mir-10-P1-v1
supercont1.440: 813557-813619 [+]
Ensembl
|
Variant | Aae-Mir-10-P1-v1 |
Seed |
CCCUGUA |
Precursor (pre-Mir +30nt flank) |
ACAAAUUUCGUCGAUUUUUGUUCUACAUCUACCCUGUAGAUCCGAAUUUGUUUGAAUAUUUAACAAGCGACAAAUUCGGUUCUAGAGAGGUUUGUGUGGGGCAUUUGAUUCCAUCGGAAAUAG
Get precursor sequence
|
Structure | 10 20 30 40 50 60
ACAAAUUUCGUCGAUUUU-- CU -| G U UGAAUAU
UGUUCUACAU ACC CU UAGA CCGAAUUUGUU U
ACGGGGUGUG UGG GA AUCU GGCUUAAACAG U
GAUAAAGGCUACCUUAGUUU UU A^ G U CGAACAA
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Aae-Mir-10-P1-v1_5p |
mirBase accession | MIMAT0014277 |
Sequence |
0- ACCCUGUAGAUCCGAAUUUGUU -22
Get sequence
|
Star sequence |
Aae-Mir-10-P1-v1_3p* |
mirBase accession | None |
Sequence |
40- CAAAUUCGGUUCUAGAGAGGUUU -63
Get sequence
|
Variant | Aae-Mir-10-P1-v2 |
Seed |
ACCCUGU |
Precursor (pre-Mir +30nt flank) |
AACAAAUUUCGUCGAUUUUUGUUCUACAUCUACCCUGUAGAUCCGAAUUUGUUUGAAUAUUUAACAAGCGACAAAUUCGGUUCUAGAGAGGUUUGUGUGGGGCAUUUGAUUCCAUCGGAAAUAGA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
AACAAAUUUCGUCGAUUUU-- CU -| G U UUGAAUAU
UGUUCUACAU ACC CU UAGA CCGAAUUUGU U
ACGGGGUGUG UGG GA AUCU GGCUUAAACA U
AGAUAAAGGCUACCUUAGUUU UU A^ G U GCGAACAA
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Aae-Mir-10-P1-v2_5p |
mirBase accession | MIMAT0014277 |
Sequence |
0- UACCCUGUAGAUCCGAAUUUGU -22
Get sequence
|
Star sequence |
Aae-Mir-10-P1-v2_3p* |
mirBase accession | None |
Sequence |
42- AAAUUCGGUUCUAGAGAGGUUUG -65
Get sequence
|