MirGeneDB 3.0
MirGeneDB ID

Ebu-Mir-10-P1f

Family name MIR-10 (all species)
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-10-P1e  Ebu-Mir-10-P2e  Ebu-Mir-10-P2f  Ebu-Mir-10-P3e  Ebu-Mir-10-P3f 
Orthologues Aae-Mir-10-P1-v1  Adi-Mir-10  Aga-Mir-10-P1-v1  Agr-Mir-10-P1  Asp-Mir-10  Asu-Mir-10-P1  Bfl-Mir-10-P1-v1  Bge-Mir-10-P1-v1  Bla-Mir-10-P1-v1  Cbr-Mir-10-P1  Cel-Mir-10-P1  Cte-Mir-10-P1  Dan-Mir-10-P1  Dgr-Mir-10-P1  Dlo-Mir-10-P1-v1  Dma-Mir-10-P1-v1  Dme-Mir-10-P1  Dmo-Mir-10-P1  Dpu-Mir-10-P1-v1  Dsi-Mir-10-P1  Dya-Mir-10-P1  Eba-Mir-10-P1  Efe-Mir-10-P1  Egr-Mir-10-P1  Gpa-Mir-10-P1  Gsp-Mir-10-P1  Hme-Mir-10-P1-v1  Hru-Mir-10-P1  Isc-Mir-10-P1-v1  Lgi-Mir-10-P1  Lhy-Mir-10-P1  Llo-Mir-10-P1  Mgi-Mir-10-P1  Mom-Mir-10-P1  Npo-Mir-10-P1  Nve-Mir-10  Ofu-Mir-10-P1  Pau-Mir-10-P1  Pca-Mir-10-P1  Pdu-Mir-10-P1  Pfl-Mir-10-P1  Pmi-Mir-10-P1  Pve-Mir-10-P1  Rph-Mir-10-P1  Sko-Mir-10-P1  Sma-Mir-10-P1  Snu-Mir-10-P1  Spu-Mir-10-P1  Tca-Mir-10-P1-v1  War-Mir-10-P1  Xbo-Mir-10-P1 
Node of Origin (locus) E. burgeri
Node of Origin (family) Eumetazoa
Genome context
(Eburgeri_3)		 FYBX02010694.1: 2257345-2257403 [+] UCSC Ensembl
Seed ACCCUGU
Precursor
(pre-Mir +30nt flank)		 
GCAUUCUGCACGGUACUGUUUUAGCCCAUGUACCCUGUAGGUACGACCUUGUGUCUAAAACUUCUGCAAGGUUGUAUAUACAGAGUACGUGUUGCUAUGACACAUGUCAACAAGAAACA
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Structure
        10         20         30        40        50         
GCAUUCUGCACGGUACU-   U    C-|      C     G            GUCUAA 
                  GUU UAGC  CAUGUAC CUGUA GUACGACCUUGU      \
                  CAG AUCG  GUGCAUG GACAU UAUGUUGGAACG      A
ACAAAGAACAACUGUACA   U    UU^      A     A            UCUUCA 
       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
- +
To
Mature sequence

Ebu-Mir-10-P1f_5p
mirBase accessionNone
Sequence 
0- UACCCUGUAGGUACGACCUUGUG -23
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Star sequence

Ebu-Mir-10-P1f_3p* (predicted)
mirBase accessionNone
Sequence 
36- CAAGGUUGUAUAUACAGAGUACG -59
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