MirGeneDB 2.1

MirGeneDB ID

Cte-Mir-10-P6

Family name MIR-10 (all species)
Seed UACCCUG
Species Polychaete worm (Capitella teleta)
MiRBase ID cte-mir-1991
Paralogues Cte-Mir-10-P1  Cte-Mir-10-P2  Cte-Mir-10-P3  Cte-Mir-10-P4  Cte-Mir-10-P5  Cte-Mir-10-P7 
Orthologues Cgi-Mir-10-P6  Efe-Mir-10-P6  Esc-Mir-10-P6  Lgi-Mir-10-P6  Npo-Mir-10-P6  Nve-Mir-10  Ovu-Mir-10-P6 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Eumetazoa
Genome context
(Capitella_teleta_v1.0)
CAPTEscaffold_292: 57245-57305 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AAACUGCUGACAAUCCUCGCCAUCAAUUCUUUACCCUGUUACAUUGUAGAAUGCUUGUUAUUCCUUUGUAUUCUCAAUGUACAAGGUAUUAAGAAUUGGAGGUUGAAUUACUUCCGGAAGU
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Structure
        10        20        30          40        50        60 
AAACUGCUGACAAUCCUC   AU        --|   C   U      U       UUGUUA 
                  GCC  CAAUUCUU  UACC UGU ACAUUG AGAAUGC      \
                  UGG  GUUAAGAA  AUGG ACA UGUAAC UCUUAUG      U
UGAAGGCCUUCAUUAAGU   AG        UU^   A   -      -       UUUCCU 
 .       110       100        90         80         70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
 +
To
Mature sequence

Cte-Mir-10-P6_5p

mirBase accessionMIMAT0013551
Sequence
0- UUACCCUGUUACAUUGUAGAAUGC -24
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Star sequence

Cte-Mir-10-P6_3p* (predicted)

mirBase accessionNone
Sequence
39- AUUCUCAAUGUACAAGGUAUUA -61
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