Mir-10-P6

MirGeneDB ID

War-Mir-10-P6

Family name

MIR-10 (all species)

Species

Wirenia (Solenogaster) (Wirenia argentea)

MiRBase ID

Paralogues

War-Mir-10-P1 War-Mir-10-P2s War-Mir-10-P2t War-Mir-10-P3 War-Mir-10-P5

Orthologues

Adi-Mir-10 Agr-Mir-10-P6 Asp-Mir-10 Cte-Mir-10-P6 Eba-Mir-10-P6 Efe-Mir-10-P6 Esc-Mir-10-P6 Hru-Mir-10-P6 Lgi-Mir-10-P6 Lhy-Mir-10-P6 Mgi-Mir-10-P6 Mom-Mir-10-P6 Npo-Mir-10-P6 Nve-Mir-10 Obi-Mir-10-P6 Ofu-Mir-10-P6 Ovu-Mir-10-P6 Pve-Mir-10-P6 Rph-Mir-10-P6

Node of Origin (locus)

Neotrochozoa

Node of Origin (family)

Eumetazoa

Genome context
(GCA_025802215.1_ASM2580221v1_Wirenia)

WNLI01106048.1: 3757-3815 [+] Ensembl

Seed

UUACCCU

Precursor
(pre-Mir +30nt flank)

CUCAGACCUACCAUGUGUCGUGCUGAGCCACUUACCCUGUCAAUCGGAGAAAGUGUUCCAGACCCACUUCUCGUUUUACAGGGUAUAUUGCUCGGCAUGAACCGCUUCAAAACACAGCA

Get precursor sequence

Structure

        10          20        30        40        50         
CUCAGACCUACCAUGUG--|          CACU        C  UCG     AGUGUUC 
                   UCGUGCUGAGC    UACCCUGU AA   GAGAA       C
                   AGUACGGCUCG    AUGGGACA UU   CUCUU       A
ACGACACAAAACUUCGCCA^          UUAU        U  UG-     CACCCAG 
       110       100        90        80         70        60

Deep sequencing

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3' NTU

Unknown

Motifs

CNNC at 3p(+17), UGUG in loop

Tissue expression

To

Mature sequence

War-Mir-10-P6_5p

mirBase accession

None

Sequence

0- CUUACCCUGUCAAUCGGAGAAAG -23

Get sequence

Star sequence

War-Mir-10-P6_3p* (predicted)

mirBase accession

None

Sequence

37- UUCUCGUUUUACAGGGUAUAUU -59

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