MirGeneDB 3.0

MirGeneDB ID

Npo-Mir-10-P6

Family name MIR-10 (all species)
Species Chambered Nautilus (Nautilus pompilius)
MiRBase ID
Paralogues Npo-Mir-10-P1  Npo-Mir-10-P2 
Orthologues Adi-Mir-10  Agr-Mir-10-P6  Asp-Mir-10  Cte-Mir-10-P6  Eba-Mir-10-P6  Efe-Mir-10-P6  Esc-Mir-10-P6  Hru-Mir-10-P6  Lgi-Mir-10-P6  Lhy-Mir-10-P6  Mgi-Mir-10-P6  Mom-Mir-10-P6  Nve-Mir-10  Obi-Mir-10-P6  Ofu-Mir-10-P6  Ovu-Mir-10-P6  Pve-Mir-10-P6  Rph-Mir-10-P6  War-Mir-10-P6 
Node of Origin (locus) Neotrochozoa
Node of Origin (family) Eumetazoa
Genome context
(GCA_018389105_NPO)
JACATO010002743.1: 273043-273102 [-] Ensembl
Seed UUACCCU
Precursor
(pre-Mir +30nt flank)
CAGUUCUUCGGACGUCGGCUACGGGGUAGACUUACCCUGUGAAUCGGAGAAGUCUCUUUGAUACACACUUCUCGUUUCACAGGGUAUAUUUACCGCGCGGCACUAACUGACACGAUGGUC
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Structure
        10          20        30        40        50          
CAGUUCUUCGGACGUCG--| UA  G      CU           UCG       CUCUUU 
                   GC  CG GGUAGA  UACCCUGUGAA   GAGAAGU      \
                   CG  GC CCAUUU  AUGGGACACUU   CUCUUCA      G
CUGGUAGCACAGUCAAUCA^ GC  G      AU           UG-       CACAUA 
.       110       100        90        80         70
Deep sequencing
3' NTU Unknown
MotifsNo
Mature sequence

Npo-Mir-10-P6_5p (predicted)

mirBase accessionNone
Sequence
0- CUUACCCUGUGAAUCGGAGAAGU -23
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Star sequence

Npo-Mir-10-P6_3p* (predicted)

mirBase accessionNone
Sequence
38- UUCUCGUUUCACAGGGUAUAUU -60
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