MirGeneDB 3.0
104 microRNA genes with seed CAGUGCA
Sort by genome coordinates Motifs
MirGeneDB ID ▼ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Pbv-Mir-9650 pbv-mir-9650 MIR-9650 CAGUGCA MIMAT0039096 MIMAT0039097 KE960999.1 18251 18307 - P. bivittatus P. bivittatus No
Xla-Mir-148-P4b None MIR-148 AAGUUCU None None NC_030727.1 128198562 128198622 - X. laevis Vertebrata No 1 1
Xla-Mir-148-P4a xla-mir-148b MIR-148 AAGUUCU MIMAT0046468 MIMAT0046469 NC_030726.1 147746357 147746417 - X. laevis Vertebrata No 1 1
Xtr-Mir-148-P4 xtr-mir-148b MIR-148 CAGUGCA None MIMAT0003605 chr2 142379073 142379133 - Gnathostomata Vertebrata No 1 1
Tgu-Mir-148-P4 None MIR-148 CAGUGCA None None 29 2800940 2800998 + Gnathostomata Vertebrata No 1 1 1
Spt-Mir-148-P4 None MIR-148 CAGUGCA None None QEPC01003896.1 758174 758234 - Gnathostomata Vertebrata Unknown 1 1
Sha-Mir-148-P4 None MIR-148 CAGUGCA None None GL861729.1 735434 735494 + Gnathostomata Vertebrata No 1 1
Rno-Mir-148-P4 rno-mir-148b MIR-148 CAGUGCA MIMAT0004645 MIMAT0000579 chr7 144912061 144912119 + Gnathostomata Vertebrata No 1 1
Pbv-Mir-148-P4 pbv-mir-148b MIR-148 CAGUGCA MIMAT0038966 MIMAT0038967 KE953059.1 20840 20900 + Gnathostomata Vertebrata No 1 1
Pab-Mir-148-P4 None MIR-148 CAGUGCA None None CM054689.2 52136036 52136096 + Gnathostomata Vertebrata No 1 1
Ocu-Mir-148-P4 ocu-mir-148b MIR-148 CAGUGCA MIMAT0048261 MIMAT0048262 chr4 38090666 38090726 + Gnathostomata Vertebrata No 1 1
Neu-Mir-148-P4 None MIR-148 CAGUGCA None None CM051815.1 227536167 227536227 + Gnathostomata Vertebrata No 1 1
Mun-Mir-148-P4 None MIR-148 CAGUGCA None None LR594634.1 313646150 313646210 - Gnathostomata Vertebrata No 1
Mmu-Mir-148-P4 mmu-mir-148b MIR-148 CAGUGCA MIMAT0017036 MIMAT0000580 chr15 103285148 103285206 + Gnathostomata Vertebrata No 1 1
Mmr-Mir-148-P4 mmr-mir-148b MIR-148 CAGUGCA None MIMAT0049209 CM007667.1 56635294 56635354 - Gnathostomata Vertebrata No 1 1
Mml-Mir-148-P4 mml-mir-148b MIR-148 CAGUGCA MIMAT0026826 MIMAT0006209 CM014346.1 53951403 53951463 + Gnathostomata Vertebrata No 1 1
Loc-Mir-148-P4 None MIR-148 CAGUGCA None None LG4 16157724 16157784 + Gnathostomata Vertebrata Yes 1 1
Lch-Mir-148-P4 None MIR-148 CAGUGCA None None JH126829.1 753484 753544 - Gnathostomata Vertebrata Unknown 1
Laf-Mir-148-P4 None MIR-148 CAGUGCA None None GL010029.1 40733307 40733367 + Gnathostomata Vertebrata No 1 1
Hsa-Mir-148-P4 hsa-mir-148b MIR-148 CAGUGCA MIMAT0004699 MIMAT0000759 chr12 54337239 54337299 + Gnathostomata Vertebrata No 1 1
Gja-Mir-148-P4 None MIR-148 CAGUGCA None None NW_015161593.1 32569 32629 + Gnathostomata Vertebrata No 1 1
Gga-Mir-148-P4 gga-mir-148b MIR-148 CAGUGCA MIMAT0050026 MIMAT0050027 33 7737151 7737210 + Gnathostomata Vertebrata No 1 1
Ete-Mir-148-P4 None MIR-148 CAGUGCA None None JH980427 1097293 1097353 + Gnathostomata Vertebrata No 1 1
Eca-Mir-148-P4 eca-mir-148b MIR-148 CAGUGCA MIMAT0012971 MIMAT0012972 CM009153.1 72050093 72050153 + Gnathostomata Vertebrata No 1 1
Dno-Mir-148-P4 dno-mir-148b MIR-148 CAGUGCA MIMAT0047671 MIMAT0047672 JH568788 119105 119165 + Gnathostomata Vertebrata No 1 1
Cpo-Mir-148-P4 cpo-mir-148b MIR-148 CAGUGCA MIMAT0047024 MIMAT0047025 scaffold_9 45498342 45498402 - Gnathostomata Vertebrata No 1 1
Cpi-Mir-148-P4 cpi-mir-148b MIR-148 CAGUGCA None MIMAT0037784 JH584844 447341 447401 - Gnathostomata Vertebrata No 1 1
Cmi-Mir-148-P4 None MIR-148 CAGUGCA None None KI638125.1 5404 5461 - Gnathostomata Vertebrata No 1 1
Cli-Mir-148-P4 cli-mir-148b MIR-148 CAGUGCA None MIMAT0038544 scaffold922 322361 322420 + Gnathostomata Vertebrata No 1
Cja-Mir-148-P4 None MIR-148 CAGUGCA None None CM021923.1 61648679 61648739 - Gnathostomata Vertebrata No 1 1
Cfa-Mir-148-P4 cfa-mir-148b MIR-148 CAGUGCA None MIMAT0006663 chr27 975146 975206 - Gnathostomata Vertebrata No 1 1
Bta-Mir-148-P4 bta-mir-148b MIR-148 CAGUGCA None MIMAT0003814 NC_037332.1 25734120 25734180 - Gnathostomata Vertebrata No 1 1
Ami-Mir-148-P4 ami-mir-148b MIR-148 CAGUGCA MIMAT0038178 MIMAT0038179 NW_017712407.1 40039 40097 + Gnathostomata Vertebrata No 1 1
Aca-Mir-148-P4 aca-mir-148b MIR-148 CAGUGCA MIMAT0021782 MIMAT0021783 2 71202722 71202782 - Gnathostomata Vertebrata No 1 1
Tni-Mir-148-P3 tni-mir-152 MIR-148 CAGUGCA None MIMAT0003104 Un_random 5385294 5385354 - Gnathostomata Vertebrata No 1 1
Sto-Mir-148-P3 None MIR-148 CAGUGCA None None BFAA01005756.1 59573 59635 - Gnathostomata Vertebrata No 1
Spt-Mir-148-P3 None MIR-148 CAGUGCA None None QEPC01013663.1 823442 823500 + Gnathostomata Vertebrata Unknown 1
Sha-Mir-148-P3 None MIR-148 CAGUGCA None None GL856828.1 332404 332462 - Gnathostomata Vertebrata No 1
Rno-Mir-148-P3 rno-mir-152 MIR-148 CAGUGCA MIMAT0017134 MIMAT0000854 chr10 84719332 84719392 + Gnathostomata Vertebrata No 1
Pab-Mir-148-P3 None MIR-148 CAGUGCA None None CM054698.2 68038817 68038875 + Gnathostomata Vertebrata No 1
Ocu-Mir-148-P3 ocu-mir-152 MIR-148 CAGUGCA MIMAT0048267 MIMAT0048268 chr19 39313272 39313330 + Gnathostomata Vertebrata No 1
Oan-Mir-148-P3 None MIR-148 CAGUGCA None None NC_041738.1 57629707 57629767 - Gnathostomata Vertebrata No
Neu-Mir-148-P3 None MIR-148 GGUUCUG None None CM051814.1 353154851 353154909 + Gnathostomata Vertebrata No 1
Mmu-Mir-148-P3 mmu-mir-152 MIR-148 CAGUGCA MIMAT0016991 MIMAT0000162 chr11 96850400 96850460 + Gnathostomata Vertebrata No 1
Mmr-Mir-148-P3 mmr-mir-152 MIR-148 CAGUGCA MIMAT0049147 None CM007676.1 26922037 26922097 + Gnathostomata Vertebrata No 1
Mml-Mir-148-P3 mml-mir-152 MIR-148 CAGUGCA MIMAT0026829 MIMAT0006214 CM014351.1 48770711 48770771 + Gnathostomata Vertebrata No 1 1
Mdo-Mir-148-P3 mdo-mir-152 MIR-148 CAGUGCA MIMAT0026671 MIMAT0004117 2 200362987 200363045 - Gnathostomata Vertebrata No 1
Mal-Mir-148-P3 None MIR-148 AGUUCUG None None KV884780.1 550961 551019 + Gnathostomata Vertebrata No 1 1
Loc-Mir-148-P3 None MIR-148 CAGUGCA None None LG15 8863370 8863428 - Gnathostomata Vertebrata Yes 1
Laf-Mir-148-P3 None MIR-148 CAGUGCA None None GL010058.1 20280003 20280063 + Gnathostomata Vertebrata Unknown
Hsa-Mir-148-P3 hsa-mir-152 MIR-148 CAGUGCA MIMAT0026479 MIMAT0000438 chr17 48037174 48037232 - Gnathostomata Vertebrata No 1
Gmo-Mir-148-P3 gmo-mir-152 MIR-148 CAGUGCA MIMAT0044018 MIMAT0044019 contig24317 803 861 - Gnathostomata Vertebrata No 1 1 1
Eca-Mir-148-P3 None MIR-148 CAGUGCA None None CM009158.1 24247096 24247154 - Gnathostomata Vertebrata No 1 1
Dre-Mir-148-P3 dre-mir-152 MIR-148 CAGUGCA None MIMAT0001847 chr3 24095972 24096030 + Gnathostomata Vertebrata No 1
Dno-Mir-148-P3 None MIR-148 CAGUGCA None None 1890563092_name_248666480_mate_1890567939 798 856 - Gnathostomata Vertebrata No 1
Cpo-Mir-148-P3 cpo-mir-152 MIR-148 CAGUGCA MIMAT0047032 MIMAT0047033 scaffold_53 9067371 9067431 + Gnathostomata Vertebrata No 1
Cpi-Mir-148-P3 cpi-mir-152 MIR-148 CAGUGCA MIMAT0037785 MIMAT0037786 JH584731 1980029 1980087 - Gnathostomata Vertebrata No
Cmi-Mir-148-P3 None MIR-148 CAGUGCA None None KI635976.1 1771379 1771440 + Gnathostomata Vertebrata No 1
Cja-Mir-148-P3 None MIR-148 CAGUGCA None None CM021919.1 114337348 114337406 + Gnathostomata Vertebrata No 1
Cfa-Mir-148-P3 cfa-mir-152 MIR-148 CAGUGCA None MIMAT0006738 chr9 24335161 24335219 - Gnathostomata Vertebrata No 1 1
Bta-Mir-148-P3 bta-mir-152 MIR-148 CAGUGCA None MIMAT0009238 NC_037346.1 38444489 38444547 + Gnathostomata Vertebrata No 1 1
Ami-Mir-148-P3 ami-mir-152 MIR-148 CAGUGCA MIMAT0038182 MIMAT0038183 NW_017708231.1 2942476 2942534 - Gnathostomata Vertebrata No
Tni-Mir-148-P2 tni-mir-148 MIR-148 CAGUGCA None MIMAT0002962 2 13327074 13327133 - Gnathostomata Vertebrata No
Mal-Mir-148-P2 None MIR-148 CAGUGCA None None KV884718.1 1025614 1025671 + Gnathostomata Vertebrata No 1
Loc-Mir-148-P2 None MIR-148 CAGUGCA None None LG12 15322557 15322614 - Gnathostomata Vertebrata No 1
Gmo-Mir-148-P2 gmo-mir-148 MIR-148 CAGUGCA MIMAT0044086 MIMAT0044087 GeneScaffold_1009 245024 245081 - Gnathostomata Vertebrata No 1
Dre-Mir-148-P2 dre-mir-148 MIR-148 CAGUGCA None MIMAT0001845 chr9 1644693 1644750 - Gnathostomata Vertebrata Yes 1
Cmi-Mir-148-P2 None MIR-148 CAGUGCA None None KI635868.1 5439530 5439588 + Gnathostomata Vertebrata No
Xla-Mir-148-P1b None MIR-148 CAGUGCA None None NC_030735.1 33079270 33079329 - X. laevis Vertebrata No 1
Xla-Mir-148-P1a xla-mir-148a MIR-148 CAGUGCA MIMAT0046466 MIMAT0046467 NC_030734.1 38926039 38926098 - X. laevis Vertebrata No 1
Xtr-Mir-148-P1 xtr-mir-148a MIR-148 CAGUGCA None MIMAT0003664 chr6 33524418 33524477 + Gnathostomata Vertebrata No 1
Tgu-Mir-148-P1 tgu-mir-148a MIR-148 CAGUGCA MIMAT0026973 MIMAT0014503 2 33394964 33395023 - Gnathostomata Vertebrata No 1
Sto-Mir-148-P1 None MIR-148 CAGUGCA None None BFAA01022211.1 4420 4478 - Gnathostomata Vertebrata No
Spt-Mir-148-P1 None MIR-148 CAGUGCA None None QEPC01011191.1 1499548 1499607 - Gnathostomata Vertebrata Unknown 1 1
Rno-Mir-148-P1 rno-mir-148a MIR-148 CAGUGCA MIMAT0035724 MIMAT0035725 chr4 81013284 81013343 - Gnathostomata Vertebrata No 1 1
Pbv-Mir-148-P1 pbv-mir-148a MIR-148 CAGUGCA MIMAT0038964 MIMAT0038965 KE953020.1 321926 321987 + Gnathostomata Vertebrata No
Pab-Mir-148-P1 None MIR-148 CAGUGCA None None CM054685.2 59245993 59246052 + Gnathostomata Vertebrata No 1 1
Ocu-Mir-148-P1 ocu-mir-148a MIR-148 CAGUGCA MIMAT0048259 MIMAT0048260 chr10 10783749 10783808 - Gnathostomata Vertebrata No 1
Oan-Mir-148-P1 oan-mir-148 MIR-148 CAGUGCA MIMAT0007137 MIMAT0007138 NC_041735.1 56269380 56269439 + Gnathostomata Vertebrata No 1
Mun-Mir-148-P1 None MIR-148 CAGUGCA None None LR594632.1 166647922 166647981 - Gnathostomata Vertebrata No 1
Mmu-Mir-148-P1 mmu-mir-148a MIR-148 CAGUGCA MIMAT0004617 MIMAT0000516 chr6 51269829 51269888 - Gnathostomata Vertebrata No 1 1
Mmr-Mir-148-P1 None MIR-148 CAGUGCA None None CM007671.1 80058424 80058483 - Gnathostomata Vertebrata No 1 1
Mml-Mir-148-P1 mml-mir-148a MIR-148 CAGUGCA MIMAT0026825 MIMAT0006208 CM014338.1 89189906 89189965 + Gnathostomata Vertebrata No 1 1
Mdo-Mir-148-P1 mdo-mir-148 MIR-148 CAGUGCA MIMAT0026930 MIMAT0012737 8 298347769 298347828 + Gnathostomata Vertebrata No 1
Loc-Mir-148-P1 None MIR-148 CAGUGCA None None LG11 40856666 40856725 - Gnathostomata Vertebrata No
Lch-Mir-148-P1 None MIR-148 CAGUGCA None None JH126711.1 735576 735635 - Gnathostomata Vertebrata Unknown
Laf-Mir-148-P1 None MIR-148 CAGUGCA None None GL010032.1 32557691 32557750 + Gnathostomata Vertebrata No 1 1
Hsa-Mir-148-P1 hsa-mir-148a MIR-148 CAGUGCA MIMAT0004549 MIMAT0000243 chr7 25949922 25949981 - Gnathostomata Vertebrata No 1 1
Gja-Mir-148-P1 None MIR-148 CAGUGCA None None NW_015170898.1 349164 349223 - Gnathostomata Vertebrata No 1 1
Gga-Mir-148-P1 gga-mir-148a MIR-148 CAGUGCA MIMAT0026503 MIMAT0001120 2 32120654 32120713 - Gnathostomata Vertebrata No 1
Ete-Mir-148-P1 None MIR-148 CAGUGCA None None JH980305 53987542 53987601 - Gnathostomata Vertebrata No 1
Eca-Mir-148-P1 eca-mir-148a MIR-148 CAGUGCA None MIMAT0012935 CM009151.1 57356765 57356824 - Gnathostomata Vertebrata No 1 1
Dno-Mir-148-P1 dno-mir-148a MIR-148 CAGUGCA MIMAT0047669 MIMAT0047670 JH568260 707047 707106 + Gnathostomata Vertebrata No 1 1
Cpo-Mir-148-P1 cpo-mir-148a MIR-148 CAGUGCA MIMAT0047022 MIMAT0047023 scaffold_44 2858896 2858955 - Gnathostomata Vertebrata No 1 1
Cpi-Mir-148-P1 cpi-mir-148a MIR-148 CAGUGCA MIMAT0037782 MIMAT0037783 JH584577 4008202 4008261 - Gnathostomata Vertebrata No 1
Cmi-Mir-148-P1 None MIR-148 CAGUGCA None None KI635933.1 1745993 1746051 + Gnathostomata Vertebrata No
Cli-Mir-148-P1 cli-mir-148a MIR-148 CAGUGCA MIMAT0038542 MIMAT0038543 scaffold699 533825 533884 - Gnathostomata Vertebrata No 1
Cja-Mir-148-P1 None MIR-148 CAGUGCA None None CM021922.1 29445932 29445993 + Gnathostomata Vertebrata No 1
Cfa-Mir-148-P1 cfa-mir-148a MIR-148 CAGUGCA None MIMAT0006622 chr14 39301847 39301906 - Gnathostomata Vertebrata No 1 1
Bta-Mir-148-P1 bta-mir-148a MIR-148 CAGUGCA None MIMAT0003522 NC_037331.1 69949485 69949544 + Gnathostomata Vertebrata No 1 1
Aca-Mir-148-P1 aca-mir-148a MIR-148 CAGUGCA MIMAT0021780 MIMAT0021781 6 31781720 31781779 - Gnathostomata Vertebrata No 1 1
Pma-Mir-148-o2 pma-mir-152b MIR-148 CAGUGCA None MIMAT0019482 NC_046070.1 1713926 1713984 + P. marinus Vertebrata No 1
Pma-Mir-148-o1 pma-mir-152a MIR-148 CAGUGCA None MIMAT0019481 NC_046087.1 12147458 12147519 + P. marinus Vertebrata No 1
Ebu-Mir-148 None MIR-148 CAGUGCA None None FYBX02010798.1 399718 399777 + Vertebrata Vertebrata No 1 1

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