MirGeneDB 2.1

MirGeneDB ID

Mml-Mir-148-P3

Family name MIR-148 (all species)
Seed CAGUGCA
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-152
Paralogues Mml-Mir-148-P1  Mml-Mir-148-P4 
Orthologues Ami-Mir-148-P3  Bta-Mir-148-P3  Cfa-Mir-148-P3  Cmi-Mir-148-P3  Cpi-Mir-148-P3  Cpo-Mir-148-P3  Dno-Mir-148-P3  Dre-Mir-148-P3  Ebu-Mir-148  Gmo-Mir-148-P3  Hsa-Mir-148-P3  Loc-Mir-148-P3  Mal-Mir-148-P3  Mdo-Mir-148-P3  Mmu-Mir-148-P3  Oan-Mir-148-P3  Ocu-Mir-148-P3  Rno-Mir-148-P3  Sha-Mir-148-P3  Spt-Mir-148-P3  Sto-Mir-148-P3  Tni-Mir-148-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(rheMac8_trace)
chr16: 41870691-41870751 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGGAGGCUCGGCCCGCUGUCCCCCCCGGCCCAGGUUCUGUGAUACACUCCGACUCGGGCUCUGGAGCAGUCAGUGCAUGACAGAACUUGGGCCCGGAAGGACCUUCUGCACCCAACGGGCA
Get precursor sequence
Structure
        10          20        30        40        50        60 
AGGAGGCUCGGCCCGCU--|   CC  C              G  A    CC    CGGGCU 
                   GUCC  CC GGCCCAGGUUCUGU AU CACU  GACU      \
                   CAGG  GG CCGGGUUCAAGACA UA GUGA  CUGA      C
ACGGGCAACCCACGUCUUC^   AA  C              G  C    --    CGAGGU 
 .       110       100        90        80          70
Deep sequencing
Go to detailed chart
CommentThere is a second Drosha cut +1 on both arms.
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Star sequence

Mml-Mir-148-P3_5p*

mirBase accessionMIMAT0026829
Sequence
0- CAGGUUCUGUGAUACACUCCGACU -24
Get sequence
Proposed targets TargetScanVert: mml-miR-152-5p
Mature sequence

Mml-Mir-148-P3_3p

mirBase accessionMIMAT0006214
Sequence
39- UCAGUGCAUGACAGAACUUGGG -61
Get sequence
Proposed targets TargetScanVert: mml-miR-152-3p