MirGeneDB ID | Mml-Mir-148-P3 |
Family name |
MIR-148 (all species) |
Seed |
CAGUGCA |
Species |
Rhesus monkey (Macaca mulatta) |
MiRBase ID |
mml-mir-152
|
Paralogues |
Mml-Mir-148-P1
Mml-Mir-148-P4
|
Orthologues |
Ami-Mir-148-P3
Bta-Mir-148-P3
Cfa-Mir-148-P3
Cmi-Mir-148-P3
Cpi-Mir-148-P3
Cpo-Mir-148-P3
Dno-Mir-148-P3
Dre-Mir-148-P3
Ebu-Mir-148
Gmo-Mir-148-P3
Hsa-Mir-148-P3
Loc-Mir-148-P3
Mal-Mir-148-P3
Mdo-Mir-148-P3
Mmu-Mir-148-P3
Oan-Mir-148-P3
Ocu-Mir-148-P3
Rno-Mir-148-P3
Sha-Mir-148-P3
Spt-Mir-148-P3
Sto-Mir-148-P3
Tni-Mir-148-P3
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Vertebrata
|
Genome context (rheMac8_trace) |
chr16: 41870691-41870751 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AGGAGGCUCGGCCCGCUGUCCCCCCCGGCCCAGGUUCUGUGAUACACUCCGACUCGGGCUCUGGAGCAGUCAGUGCAUGACAGAACUUGGGCCCGGAAGGACCUUCUGCACCCAACGGGCA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
AGGAGGCUCGGCCCGCU--| CC C G A CC CGGGCU
GUCC CC GGCCCAGGUUCUGU AU CACU GACU \
CAGG GG CCGGGUUCAAGACA UA GUGA CUGA C
ACGGGCAACCCACGUCUUC^ AA C G C -- CGAGGU
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
Comment | There is a second Drosha cut +1 on both arms. |
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
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Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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Star sequence |
Mml-Mir-148-P3_5p* |
mirBase accession | MIMAT0026829 |
Sequence |
0- CAGGUUCUGUGAUACACUCCGACU -24
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-152-5p
|
Mature sequence |
Mml-Mir-148-P3_3p |
mirBase accession | MIMAT0006214 |
Sequence |
39- UCAGUGCAUGACAGAACUUGGG -61
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-152-3p
|