MirGeneDB 2.1
MirGeneDB ID

Sto-Mir-148-P3

Family name MIR-148 (all species)
Seed CAGUGCA
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-148-P1 
Orthologues Ami-Mir-148-P3  Bta-Mir-148-P3  Cfa-Mir-148-P3  Cmi-Mir-148-P3  Cpi-Mir-148-P3  Cpo-Mir-148-P3  Dno-Mir-148-P3  Dre-Mir-148-P3  Ebu-Mir-148  Gmo-Mir-148-P3  Hsa-Mir-148-P3  Loc-Mir-148-P3  Mal-Mir-148-P3  Mdo-Mir-148-P3  Mml-Mir-148-P3  Mmu-Mir-148-P3  Oan-Mir-148-P3  Ocu-Mir-148-P3  Rno-Mir-148-P3  Sha-Mir-148-P3  Spt-Mir-148-P3  Tni-Mir-148-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01005756.1: 59573-59635 [-]
Precursor
(pre-Mir +30nt flank)
AGGAUCCGCCGUGCAGAGGUCUCCCAAGCCGAAGGUUCUGUCAUACACUCCGGCUCUGUAACUGAGAAAAGUCAGUGCAUGACAGAACUUUGUUUUGGAAAGACCCCAACUACAAACUAAAAC
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Structure
        10         20         30        40        50        60  
AGGAUCCGCCGUGCAGA-     C-|    C     G         A    CC    CUGUAA 
                  GGUCU  CCAAG CGAAG UUCUGUCAU CACU  GGCU      C
                  CCAGA  GGUUU GUUUC AAGACAGUA GUGA  CUGA      U
CAAAAUCAAACAUCAACC     AA^    U     -         C    --    AAAGAG 
 120       110       100        90         80          70
Deep sequencing
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CommentThere is a second Drosha cut +1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Sto-Mir-148-P3_5p*
mirBase accessionNone
Sequence 
0- GAAGGUUCUGUCAUACACUCCGGCU -25
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Mature sequence

Sto-Mir-148-P3_3p
mirBase accessionNone
Sequence 
41- UCAGUGCAUGACAGAACUUUGU -63
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